Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1872 ATGCAAGTGGTGGGGAGGCTAGCCAGCTACATTAGTCGGGGTGTATCCACCGTGTCAGGCTCCGTTCGTGGCGCTGTAGATATTGTTTTAGTTGAACAGCAAGATGGGAGCTTCAAGTCGTCGCCTTGGTACGTCCGATTTGGGAAGTCCCATGGCGTTTTAACGACAGAAGAGAGGATGATCAGCATTAATGTCAATGGGGTGGAAGCAAATTTCCATATGTATATGGATCATAAAGGGCAAGCCTTCTTTCTCAGGGAGGTTGAAGTGGAAGAGGGAGAATCTTCTGGGGATGAGACAGATACTCTGGATAAGCGGCATTTGAAGTCCAGAAGCTTTTGTTTCGAATCAGACAAACCAAATTATATGGATCAGGTTGACATGAACACAGGAAACATGCTTGCCAGAACTAGTTCTGATGGATCAGTGGCAGGTTCGCTTGTCATTGGCGATAATGATTTAATTGCTGCACGTTCATTGGATTGCGCTGAGATTGCAGCCGACCTATTGGAGGTAAGGTGGTCTACCAATCTTGCTGGTCATAGACCACCTCGAAAAGATCGTGTACAATCTCAAAAGAGAAAATCTCAGCATGGTAACATGGACAGTTCTTCAAACCAACGTTGCTTACATGATGAAGCTTGTTACCTTAATGCACAAGAAGGCCTTTCTTCCAACCCTGAACTTGAAGTTCCCACAAGACTTAATGAAGATAACGGTATAAGCTCATCATGTTCAAGCACTACGGTTGCAGTTAGCCTTTCAAAACAGAAATCTGAAGTGATACCTGAACTACCAATGAGTGGTGATATTGTAGAGGACATTGAACATGACAGGAAAAAGAAGGAAGTTATAACTGAGAGAACCATCAATGATTTGGAAGCGACAACAGAGGTTACCAAAAACGAGGAAGTCGCCGAAAATGCTGATGTCATGATGCCTGAAATGATGGTTTCTCAGACTTCTCAGCAATCAAATTGTACTCATCCTGGTATTTGCAAGTCTATTGTGGCAGATATTGAAGACCAAACAGCACTGCCAAAAACTCAAGCGATCATTCTGGATATTGGACTTTGTTCAGCTGAGGAGGATGGATCAACTTGCGCTGCTGCTACTTCACCTGACAGCAGCCTGGTTAACCAAGCTTTAGAAGAGAAATTTGTGAAGGTTGAAGAAGTTTCAAGCTCATTGACGTCTCCGAAGTCTGCTCGAGATTGTGTATTTGGAAAAACAAGCAGACAGCCATATCCAAATCCAAAGGAAAAAGATTTTATTTTCAGTGACCTTGAAAGTCAAACAGCTGATCCTGAAAAGCTGAGAGTAACATCCAGTCCTACAGTTGCCCTTGATAATAATGGTGGTGGAGACGAAGACATGCAGCAGACAAAATCCTTGTCCGGTAGTTTGCATTCTCTTAATAATGTTGAGGGCCAGCATGATCTATGTCATCCCTCAATTCATTCACAGGACTCAACATGCAATATCTTGAAGCAGCCTTCATTTGGGAAAGATGATGTGAAATGTCTAAAACCAGATGATCAATTATTACCTGAGGAATCAGGTTTCAAGGACAACAATAATTTGGGGGATGTTAAAAGTACAAATATAGATCCTCACCTTGGTGTCTCTTCAGCACACAAACCTTCCCCCGGTGGGAACTGGAAACTTTGGCCTTTCTCCTTCAGGAGATCAAGTTCTGAAAAGGTTGCAGTGCCTGCTGTTGATGACAAAGCTACTAATGCTTCAGAGAGTTCAATCAACAAAGATGCAGACAAAAATGAGCTCAAACCCAAGCTATTGAAAAAGTTAATTAGGGCAAAGACACCAACAGCTGAACAGCTGGCTTCCTTGAATCTAAAGGAAGGGAAGAACACTGTAGCCTTCACTTTCTCTATGGGTACGGTGGAGGATGAACAGGTTGATGCCCAAATGTTTTTATGGAAATGGAACAGTCGTATAGTGATCTCAGACGTGGATGGGACAATTACAAAGTCAGACGTTCTAGGTCAGGTCATGCCTTTAGTGGGAGTAGACTGGTCACAGACAGGTGTTACACATTTATTCTCAGCTATCAAGGAAAATGGTTACAAACTACTTTTTCTCAGTGCTCGATCAATTTCTCAGGCCTATCAAACCAGACAATTCTTGGTTAATCTTAAGCAGGATGGAAAAGTTTTGCCTGATGGTCCTGTAGTTATTTCTCCTGATGGAATTTTCCCCTCTCTATATCGAGAAGTTATTAGAAGGACCCCTCATGAGTTTAAAATCGCAAGCTTGGAGGATATCAAGGCACTTTTCCCTCCTGAATGCAACCCATTTTATGCTGGCTTCGGAAATAGAGATACTGATGAGATCAGCTACCTCAAAGTTGGAATTCCAAGAGGGAAAATCTTCATTATTAATCCGAAGGGAGAGATTGTTGTGAACCACCGACATGACACGAAATCTTATACTTCGCTTCATGCTCTCGTGCATGGGATGTTCCCCCCTACGGACACATATGAGCAGGAGGATTTTAATTCATGGAATTACTGGAAGCTACCTCCTCATGTGCCACTTAAAGAATTACTTGGGTGA 2577 0.4269 MQVVGRLASYISRGVSTVSGSVRGAVDIVLVEQQDGSFKSSPWYVRFGKSHGVLTTEERMISINVNGVEANFHMYMDHKGQAFFLREVEVEEGESSGDETDTLDKRHLKSRSFCFESDKPNYMDQVDMNTGNMLARTSSDGSVAGSLVIGDNDLIAARSLDCAEIAADLLEVRWSTNLAGHRPPRKDRVQSQKRKSQHGNMDSSSNQRCLHDEACYLNAQEGLSSNPELEVPTRLNEDNGISSSCSSTTVAVSLSKQKSEVIPELPMSGDIVEDIEHDRKKKEVITERTINDLEATTEVTKNEEVAENADVMMPEMMVSQTSQQSNCTHPGICKSIVADIEDQTALPKTQAIILDIGLCSAEEDGSTCAAATSPDSSLVNQALEEKFVKVEEVSSSLTSPKSARDCVFGKTSRQPYPNPKEKDFIFSDLESQTADPEKLRVTSSPTVALDNNGGGDEDMQQTKSLSGSLHSLNNVEGQHDLCHPSIHSQDSTCNILKQPSFGKDDVKCLKPDDQLLPEESGFKDNNNLGDVKSTNIDPHLGVSSAHKPSPGGNWKLWPFSFRRSSSEKVAVPAVDDKATNASESSINKDADKNELKPKLLKKLIRAKTPTAEQLASLNLKEGKNTVAFTFSMGTVEDEQVDAQMFLWKWNSRIVISDVDGTITKSDVLGQVMPLVGVDWSQTGVTHLFSAIKENGYKLLFLSARSISQAYQTRQFLVNLKQDGKVLPDGPVVISPDGIFPSLYREVIRRTPHEFKIASLEDIKALFPPECNPFYAGFGNRDTDEISYLKVGIPRGKIFIINPKGEIVVNHRHDTKSYTSLHALVHGMFPPTDTYEQEDFNSWNYWKLPPHVPLKELLG 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1872 858 Pfam LNS2 (Lipin/Ned1/Smp2) 608 829 IPR013209 -
Alju07g1872 858 MobiDBLite consensus disorder prediction 179 207 - -
Alju07g1872 858 MobiDBLite consensus disorder prediction 526 540 - -
Alju07g1872 858 MobiDBLite consensus disorder prediction 400 422 - -
Alju07g1872 858 MobiDBLite consensus disorder prediction 434 461 - -
Alju07g1872 858 PANTHER LIPIN 1 849 IPR026058 -
Alju07g1872 858 Pfam lipin, N-terminal conserved region 1 94 IPR007651 -
Alju07g1872 858 SUPERFAMILY HAD-like 646 796 IPR036412 -
Alju07g1872 858 SMART lns2 653 809 IPR031315 -
Alju07g1872 858 MobiDBLite consensus disorder prediction 436 461 - -
Alju07g1872 858 MobiDBLite consensus disorder prediction 517 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1872 Alju-ChrAlju07 45048270 45055336 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g1872 07 45048270 45055336 Alju08g1087 08 8156670 8163181 CCT
Alju07g1872 07 45048270 45055336 Alju07g1872 07 45048270 45055336 ECH