Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1607 ATGGCGGATCAGTTAGCAAGGGGTGATGAATTTGAGGCGAAAGCAGAGAAGAAGCTTAATAGCTGGGGATTGTTCGGCTCCAAATACGAGGATGCTGCTGATCTCTTCGATAAAGCCGCCAATTCCTTCAAGCTTGCTAAAGCATGGGATAAAGCTGGCTCGACTTACATCAAGTTGGCAAGTTGTTACTTCAAGGTGGAAAGCAAGCATGAAGCAGCCCAAGCATATGTTGATGCTGCTCATTGCTTTAAAAAGACAAATATAAATGAGGCTGTATCTTGCTTGGACAAGGCAGTGAACATTTTCTGTGAAATTGGAAGACTCAGTATGGCTGCTAGATATTTTAAGGAAATCGCTGAATTGCATGAATCTGAACAGAACATTGAGCAGGCTATTGTTTACTATGAAAAAGCAGCTGATTTTTTTGCAAATGAAGAGGTGACAACTTCTGCTAACCAGTGCAAGCAAAAAGTTGCTCAGTTTGCTGCTCAGCTTGAACAATATCAGAAGGCAATAGATATTTATGAAGATATAGGCCGCCAGTCTTTGAACAATAATTTGTTGAAGTATGGAGTTAAAGGGCATCTTCTTAATGCTGGCATTTGCCAACTCTGTAAAGGGGATGATGTTGCTATCACCAATGCACTAGAGCGATATCAGGAATTGGATCCAACATTTTCAGGAACACGGGAATATAGACTTTTGGCGGATATTGCTGATTCAGTTGAACAAGAAGATATTGCGAAGTTTACTGATGTTGTCAAGGAATTTGACAGCATGACCCCTCTGGATTCCTGGAAGACAACCCTACTTCTGAGAGTGAAGGAAAAGCTGAAATCCAAAGAACTCGAGGAGGACGATCTCACCTAA 870 0.4149 MADQLARGDEFEAKAEKKLNSWGLFGSKYEDAADLFDKAANSFKLAKAWDKAGSTYIKLASCYFKVESKHEAAQAYVDAAHCFKKTNINEAVSCLDKAVNIFCEIGRLSMAARYFKEIAELHESEQNIEQAIVYYEKAADFFANEEVTTSANQCKQKVAQFAAQLEQYQKAIDIYEDIGRQSLNNNLLKYGVKGHLLNAGICQLCKGDDVAITNALERYQELDPTFSGTREYRLLADIADSVEQEDIAKFTDVVKEFDSMTPLDSWKTTLLLRVKEKLKSKELEEDDLT 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1607 289 Pfam Soluble NSF attachment protein, SNAP 7 278 - -
Alju07g1607 289 PANTHER SOLUBLE NSF ATTACHMENT PROTEIN SNAP 4 279 IPR000744 GO:0006886
Alju07g1607 289 FunFam Alpha-soluble NSF attachment protein-like 6 285 - -
Alju07g1607 289 Gene3D Tetratricopeptide repeat domain 7 288 IPR011990 GO:0005515
Alju07g1607 289 CDD SNAP 7 278 IPR000744 GO:0006886
Alju07g1607 289 PRINTS NSF attachment protein signature 119 136 IPR000744 GO:0006886
Alju07g1607 289 PRINTS NSF attachment protein signature 152 175 IPR000744 GO:0006886
Alju07g1607 289 PRINTS NSF attachment protein signature 28 47 IPR000744 GO:0006886
Alju07g1607 289 PRINTS NSF attachment protein signature 224 244 IPR000744 GO:0006886
Alju07g1607 289 PRINTS NSF attachment protein signature 255 275 IPR000744 GO:0006886
Alju07g1607 289 PRINTS NSF attachment protein signature 183 202 IPR000744 GO:0006886
Alju07g1607 289 PRINTS NSF attachment protein signature 91 108 IPR000744 GO:0006886
Alju07g1607 289 Coils Coil 151 178 - -
Alju07g1607 289 SUPERFAMILY TPR-like 9 281 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1607 Alju-ChrAlju07 42274407 42278763 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g1607 07 42274407 42278763 Alju07g1607 07 42274407 42278763 CCT
Alju07g1607 07 42274407 42278763 Alju07g1607 07 42274407 42278763 ECH