Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1388 ATGGCCGCGCCGGAGAGCTTGAACATGCAGCAGCCGAGCTTTCCCTCTAGGATAATGCCCCATTCAGCTCAGCCTTCGTTTTCACTTCCTTCAGTCCAGCCTCAGGCCCTGATTCCTACTCCGTCTTCGTCTGCGCCTGGACCATCTACCTCAGCTCAGCTCACTTCGCCGGAACCTTCTGGCTCTCGTATTCCAGAGCATTTGATGCACAAAAATAGGTTACAAGAGTATGCTCAAAGGTCAAACATGCCTCTACCTATTTATCACACTCCCAATGAAGGCTCTGCTCATGCTCCTAAATTTAGGTCAACGGTGTTGGTAGATGGGAAGTACTATACTTCTAAAAATGTTTTTTCTGTCCGAAAAGCTGCTGAGCAAGACGTTGCCAAACTTGCATATGAGCAGATAGTGACAAAGATCAAAGATGAAGGGCTTCCTGATATTTTTGAGAAAACTATGTTTTTCAAATCCATCTTAAATGAATTTGCTGCCAAGATGAATCTGGATAAAGTTACATACCACACTGTTCAGCAGGAAGGACATCTGTTTTTTGTATCATCGTTGGTTTTCAATGGAAAATCCTACATTGGTGATCCAGCCAGAAGCAAAAAGGAGGCTGAGCAATTGACTGCACGAACTGCCATTCTTTCAAATCTAAATGATTCTAGGTTAGGAACACGCCTTTCTGAGGTAATAAACTCAAAATTCAAATTTTGTGCTGCAATCAACAATGTGAAGGACTCACAACATACAAGTACTGTTTCACATATGGCTAGCTCGGGACATGTGTCTGTTAGTGCTACTCCTGTGACAGTTAATAATAATGAAAATAGCAACAAATTTGAGGTTGCACTTCCTGAGCCCTCTTCTAGAGAGCTTCAACAAGAATTCCCGATTTCAAAACAAGAAAAGTGCCCTGAGGAGTCCAAACTTTCAGATCTGTCTCGGCAAGCAGGTGAACCACAGCATGTTGATGATGGTTTAAGTTTGAAGAAGCGCAAAAAGAACAAGAAAAAGGCTAATAAGAAGCCCCGTATGGATTCTCTGCCTCCAGTTGCTGCATTTCCGCTCAGCCAAGCCCCTCCTCCTGTTGCATCGCCATTTCTTTTCACCCAACCTAGCTGTTCAGTGACGCAGTAA 1140 0.4368 MAAPESLNMQQPSFPSRIMPHSAQPSFSLPSVQPQALIPTPSSSAPGPSTSAQLTSPEPSGSRIPEHLMHKNRLQEYAQRSNMPLPIYHTPNEGSAHAPKFRSTVLVDGKYYTSKNVFSVRKAAEQDVAKLAYEQIVTKIKDEGLPDIFEKTMFFKSILNEFAAKMNLDKVTYHTVQQEGHLFFVSSLVFNGKSYIGDPARSKKEAEQLTARTAILSNLNDSRLGTRLSEVINSKFKFCAAINNVKDSQHTSTVSHMASSGHVSVSATPVTVNNNENSNKFEVALPEPSSRELQQEFPISKQEKCPEESKLSDLSRQAGEPQHVDDGLSLKKRKKNKKKANKKPRMDSLPPVAAFPLSQAPPPVASPFLFTQPSCSVTQ 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1388 379 SUPERFAMILY dsRNA-binding domain-like 70 136 - -
Alju07g1388 379 Gene3D - 141 226 - -
Alju07g1388 379 Gene3D - 56 140 - -
Alju07g1388 379 MobiDBLite consensus disorder prediction 299 314 - -
Alju07g1388 379 MobiDBLite consensus disorder prediction 1 65 - -
Alju07g1388 379 SMART DRBM_3 70 137 IPR014720 -
Alju07g1388 379 SMART DRBM_3 155 219 IPR014720 -
Alju07g1388 379 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 69 138 IPR014720 -
Alju07g1388 379 PANTHER RIBONUCLEASE III 38 342 IPR011907 GO:0003723|GO:0004525|GO:0006364
Alju07g1388 379 MobiDBLite consensus disorder prediction 299 379 - -
Alju07g1388 379 SUPERFAMILY dsRNA-binding domain-like 149 216 - -
Alju07g1388 379 MobiDBLite consensus disorder prediction 1 60 - -
Alju07g1388 379 Pfam Double-stranded RNA binding motif 156 215 IPR014720 -
Alju07g1388 379 Pfam Double-stranded RNA binding motif 71 135 IPR014720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1388 Alju-ChrAlju07 39230259 39234130 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g1388 07 39230259 39234130 Alju07g1388 07 39230259 39234130 CCT
Alju07g1388 07 39230259 39234130 Alju07g1388 07 39230259 39234130 ECH