Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1029 ATGGCGCCTGTGAGAACCACAGGCGCTATTGTCGGCGTGGCTTCCATCTTCGTCTCAGTCGCTTTCTCCTATTTCATCTGCGACCGTCGTTCTAAATCTTCCTCCATAAAGACACGCTCAACTTCATCAAAGAAGAAATCGAGGAAGGGGCTCGTTGATGCCATTGGGAATACTCCTTTAATTCGAATTAACAGCCTCTCCGAAGCCACGGGTTGTGAAATTTTTGGGAAGTGCGAGTTTTTGAACCCTGGAGGGAGTGTGAAAGACCGGGTTGCAGTGAAAATCATTGAAGAGGCTTTATCCTCTGGCCAGCTACGCCCAGGTGGAATAGTTACTGAAGGGAGTGTTGGAAGCACTGCCGTTAGCCTTGCTACTGTTGTGCCTGCCTACGGATGCAAATGCCATTTAGTTATCCCAGATGATGTTGCAATTGAAAAGGCTCAGATAATTGAAGCTCTAGGAGCTACTGTTGAAAAAGTTAGGCCAGTGTCAATCACTCACAAGGATCATTTTGTAAATGTTGCAAGAAGACGGGCATCAGAGGCAAATGAGTTGATGTTAGAACAAAGAAATAAATCACAATTGAATGGCGGAAACATTGGACCGATTAATGGTTACAGATCTGATGAAGATAGACACAGTTCAGCTCTTTCTATGGATTGTCAAGGCGGCTTCTTTGCTGATCAGTTTGAGAATTTGGCAAACTTCAGGGCTCACTTTGAGGGTACAGGACCTGAGATTTGGGAACAAACAAATGGGAAGTTGGATGCATTTGTTGCAGGAGCCGGCACTGGTGGCACTTTGGCTGGTGTTTCTAGGTTTCTTCAGGAAAAGAATACAAAAATCAAGTGCTTCCTTATAGATCCTCCTGGTTCTGGTTTGTTCTATAAGGTAACAAGGGGGGTGATGTACACCAAACAGGAAGCAGAAGGAAAAAGACTCAAGAATCCATTTGATACCATAACAGAAGGAATTGGATGTAATAGGATTACAAAGAATTTTATGATGGCAAAAGTTGATGGCGCTTTTCAAGCCACAGATATGGAGGCTGTTGAAATGTGTAGGTTTCTTTTGAAGAACGATGGACTATTTCTTGGGAGTTCTTCAGCAATGAATTGTGTTGGAGCAGTTAGAGTGGCACAGTCGCTGGGACCTGGTCATACAATTGTAACCATTCTCTGTGACAGTGGAATGAGACATCTGAGTAGGTTCCACAATCCTCAATACCTGTCTCAGCTTGGCTTGACTCCTAGAGCAACTGGATTAGAGTTTCTGGGTATCAAATGA 1287 0.4398 MAPVRTTGAIVGVASIFVSVAFSYFICDRRSKSSSIKTRSTSSKKKSRKGLVDAIGNTPLIRINSLSEATGCEIFGKCEFLNPGGSVKDRVAVKIIEEALSSGQLRPGGIVTEGSVGSTAVSLATVVPAYGCKCHLVIPDDVAIEKAQIIEALGATVEKVRPVSITHKDHFVNVARRRASEANELMLEQRNKSQLNGGNIGPINGYRSDEDRHSSALSMDCQGGFFADQFENLANFRAHFEGTGPEIWEQTNGKLDAFVAGAGTGGTLAGVSRFLQEKNTKIKCFLIDPPGSGLFYKVTRGVMYTKQEAEGKRLKNPFDTITEGIGCNRITKNFMMAKVDGAFQATDMEAVEMCRFLLKNDGLFLGSSSAMNCVGAVRVAQSLGPGHTIVTILCDSGMRHLSRFHNPQYLSQLGLTPRATGLEFLGIK 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1029 428 FunFam Cysteine synthase 237 401 - -
Alju07g1029 428 CDD CBS_like 56 402 - -
Alju07g1029 428 Gene3D - 82 190 IPR036052 -
Alju07g1029 428 PANTHER CYSTATHIONINE BETA-SYNTHASE 49 409 - -
Alju07g1029 428 FunFam Cysteine synthase, putative 55 84 - -
Alju07g1029 428 Gene3D - 202 409 IPR036052 -
Alju07g1029 428 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 46 407 IPR036052 -
Alju07g1029 428 ProSitePatterns Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 77 95 IPR001216 GO:0006535
Alju07g1029 428 Pfam Pyridoxal-phosphate dependent enzyme 53 395 IPR001926 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1029 Alju-ChrAlju07 31864873 31870994 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1029 55 402 Miscellaneous Gene Families AT3G04940 30.000 3.02e-34 128
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g1029 07 31864873 31870994 Alju07g1029 07 31864873 31870994 ECH