Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g0955 ATGAAGAAATCGATCTCCTCCCAGTCACAAGAGCTTGCATCTCGGATTTCTATCGGTATGTGTTATTGTTATTGGCTTGACAGGTTTCATTGTGTTCTTCGCAACATTGTTAAGAATGTTAGTTCGGAGATAATTATCGGATACCGAGCATTTGTTTCCTATTACCAAGCTACCAACGATTTAATTGATCTTGCAAAAGATGAAGCACTTCTATGTAAACTTATCAATGTTACTGTGCCTGGGACTATAGATGAGCGAGCCATCAATGCCAAAAAAGTTCTTAATCTTTGGGATAGGAATGAAAACCATACTCTCTGCCTCAATTCTTCCAAGGCTATAGTCCCATCTTGTTTTAGGGCCGATTTCCCAGATCATAAAGATTTGAACCTTAAGAAGATTCCTCAGCTTGTCGAATTGGTGGAGGATAGCCAGGCGGTTGAAGAGCTTCTTAGTTTGCCCCCAGAAAAGGTCCTACTAAAGTGGATGAATTTTCATTTCCAGCGAAGAAGGTATGATCAAACTGTTAAAAAATTTTCTTCTGATGTGAAGGATGGAAGAGCTTATGCTTATCTGCTTAATGTCCTCGCTCCTGAACATTGCAATCCATCCAACTTGGATACTAAGGATCCCATCCAAAGGGCAAAATTGGTGCTTGATCATGCAGAAAGAATGGGCTGCAAAAGACACTTGACACCCAAGGACATTGTGGTAAGTTCCTCAAATATGAATCTTGCATTTGTGGACCAAATATTTCATCAGAGGAGTGGCTTATCTACAGACAATAAAAAGATATCTTATGCTGAGATGATGACAGATGATTTGCAAACATCTAGAGAAGAGAGATGCTTCAGATGGATGCTTCTGGAGGTGTTAGACAGGATATCTCTAGGATCGGTTAACTGGAAACATGCAACAAGACCTCCAATTAAGATGCCATTTAGAAAAGTAGAGAACTGCAATCAGGATAAGAGCTTGTCAAGTGGAATCTTTTTTCTTGAGCTTCTCAGTGTTGTAGAGCCCAGGGTTGTCAAATGGAATCTTGTTACTAAGGGTGCAAGTGGTAAAGATGCAAACTCATTCCATTCACCAGCTTCCACCATCACCAACAATACTCCTGATGCGTCACCTGCCCCTTCAGTTTTCGACGAAGATGAAATCTCCTCTCTTGGCGGCGAAATCTCCAACTTAAGCATCGATGATGTTGTCTCTAACCCAACAGTTTCCTTACAACTTGATTATGAAGGGGCTAAAGAGGATCATCTAAAGTGA 1269 0.4074 MKKSISSQSQELASRISIGMCYCYWLDRFHCVLRNIVKNVSSEIIIGYRAFVSYYQATNDLIDLAKDEALLCKLINVTVPGTIDERAINAKKVLNLWDRNENHTLCLNSSKAIVPSCFRADFPDHKDLNLKKIPQLVELVEDSQAVEELLSLPPEKVLLKWMNFHFQRRRYDQTVKKFSSDVKDGRAYAYLLNVLAPEHCNPSNLDTKDPIQRAKLVLDHAERMGCKRHLTPKDIVVSSSNMNLAFVDQIFHQRSGLSTDNKKISYAEMMTDDLQTSREERCFRWMLLEVLDRISLGSVNWKHATRPPIKMPFRKVENCNQDKSLSSGIFFLELLSVVEPRVVKWNLVTKGASGKDANSFHSPASTITNNTPDASPAPSVFDEDEISSLGGEISNLSIDDVVSNPTVSLQLDYEGAKEDHLK 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g0955 422 ProSiteProfiles Calponin homology (CH) domain profile. 152 255 IPR001715 GO:0005515
Alju07g0955 422 Pfam Calponin homology (CH) domain 153 253 IPR001715 GO:0005515
Alju07g0955 422 Gene3D - 43 134 IPR036872 -
Alju07g0955 422 MobiDBLite consensus disorder prediction 353 379 - -
Alju07g0955 422 Gene3D - 135 258 IPR036872 -
Alju07g0955 422 PANTHER FIMBRIN/PLASTIN 56 113 IPR039959 GO:0051015|GO:0051017
Alju07g0955 422 SMART ch_5 33 139 IPR001715 GO:0005515
Alju07g0955 422 SMART ch_5 154 253 IPR001715 GO:0005515
Alju07g0955 422 MobiDBLite consensus disorder prediction 353 376 - -
Alju07g0955 422 SUPERFAMILY Calponin-homology domain, CH-domain 49 356 IPR036872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g0955 Alju-ChrAlju07 28590437 28598584 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g0955 321 353 EF-hand Containing Proteins AT5G55400 78.788 5.73e-09 56.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g0955 07 28590437 28598584 Alju07g0955 07 28590437 28598584 ECH