Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g0694 ATGGCGTTCACCAAACCGTACTTTTGCCTTTATTTCCACTATGAAGTGCAAAAGTGTTTGAAGTTATTATTACCCAAAAACAAGGAAACATTGGCGTATGGTACTTTCATCTCCCTCTGTACCCGCGAAAAATCAAACCCTCCCTGGAATTGCCCCACTGAGGGATATGCTAAGCGAAGTGTAAAAATGGATCCAATCGGGGCATGGAAGGAGCTTGGTTTTCGGGTCGGGTTCACGGGCCATAGTGGACACCTCCGAGTGGAGCCGCTGACGACAGTGGAGCGTTCCAATCCATTGAGTTCGCTTCCTGATTTCATCCTGCCACCTGCATTTCCGGAGGAGACACCTGAATCCATAAAGAAGTATATTGAAGAGACATATCTCACCCCAAGATTGGACCCTGATGACTTTTCACCCGAGAAAGTTGGGAGGCAGTGGGAATTTGACTGGTTTGACAGGGCTGAAGTGCCTCTGGAGCCATCTTTGCCTCGCACTGTTGTGGTTCCTGTTTGGGAACCACCATTTCGACGGCAAAACAATGTTTCAGAGCAAGGAAAATGGGAGCCAAAATCTGAGGAGGTGGATGTGTCAGAATTGATGCTAGGAGATGAAGACTCTGGGCCATTACCACGTGCTTCTGGATCTGCTAAGGACTTTGTAAGGGGAAGCATCAATAGTCGCCCCTTTCATCCTGGAGGTTTGGATAACTCCCAAACTTTAAACAGAATTCTTCCAGAAGGTGCTTCTAATGGTGAATGGGTGCGTGAAATTTTGAATGGTGGCCCTCCTCAGACAATTCCTCCAGGCTTTAAACAAGGGTTGGACCTTGGAGCATTTAAGCCATATCCTTGCTCATGGAATGTTTACAAGGATGCCAGTTCACTTGAGAGCTCGTCAGATGAAAAACTGAGTGAGTTGTCTCTACAGTTTGATGACTTATTTAAGAAGGCTTGGGAAGATGGTGTTACTCATGAACAAGAGGAAGATGGCCATTTATCAGAAGTGGAGTCTGTTGTGCTGGAAGCTGAAGTTGATAAGGCCGAGGCATCTAGCAGTATGCATGAAGATGAATTTTCACTAGATGAAGTCTTGTCAATTAAATCAGAAGGATCAAAACTACTTTTAGATGCATCTGGTGATTGTGGACGGCAGCCAAAGGAGGCTTGGGCACGTCGTGGAGGTAGCAAAGAAATCATAGATCACTTTTATGAACTTGTTCCTGATATGGCACTTCAATTTCCCTTTGATTTGGATGCATTTCAGAAGGAGGCTATATATTATCTTGAGAAAGGGGAATCTGTTTTTGTTGCTGCTCACACATCAGCTGGAAAGACAGTAGTGGCAGAATATGCATTTGCTTTAGCATCAAAGCATTGCACTAGGGCTGTGTATACCGCTCCGATAAAAACTATCAGCAATCAGAAATATAGGGATTTCTGTGGGAAGTTTGATGTTGGGCTGCTTACTGGTGATGTAACCTTGAGGCCAGAGGCTTCTTGTCTCATCATGACCACAGAAATTTTAAGGTCCATGCTCTATCGAGGTGCAGATATTATTCGGGATATTGAATGGGTTATATTTGACGAAGTGCACTATGTCAATGATGCTGAAAGAGGTGTTGTTTGGGAAGAAGTAATTATAATGCTTCCAAGACACATCAACATCATCCTCCTTTCAGCCACGGTACCTAACACGGTTGAATTCGCCGATTGGATTGGTCGGACAAAACAAAAGGAGATCCGGGTTACAGGGACAACAAAAAGACCTGTTCCGTTGGAGCACTGCCTGTTTTATTCAGGAGAGCTTTACAAAATTTGTGAAAGTGAAACATTTCTGCTTCAGGGACTGAAAGCCGCTAAGGATGCATTTAAGAAAAAAAATACAACTGCTGTTGGTGGTGGTTCTGGTCGATATTCGGGGACATCAGCAGGTCATGATGGTACTCAAGTTCAAAAACGTGAAAATGCAGCACGACTTAAACATGGAAGTAGTTTCTCCAAAGCTTCTAGAGGCTATCAGAATAATGGAAATGGCCAGAACAACTGGGAACTCAGGAGGGGAGAAGCTTCTATATGGTTGATGCTCATTAACAAGCTCTCCAAAAAGTCACTGTTGCCTGTGGTCATATTCTGTTTTTCTAAGAATCGCTGTGATAAATCAGCTGATAATATGACTGGAACTGACCTAACTAGTAGCTCAGAGAAAAGTGAAATCCGTGTTTTCTGCGATAAAGCATTTTCAAGGCTGAAAGGATCTGACAGGAATTTACCTCAGGTTGTTCGAGTCCAGAATCTTCTTCATAGAGGGATTGGTGTGCATCATGCCGGTCTTCTTCCAATTGTAAAGGAAGTAGTTGAAATGCTATTCTGCCGTGGTGTTATCAAGGTTTTGTTTTCAACGGAGACATTTGCAATGGGTGTCAATGCTCCTGCCAGAACAGTAGTCTTTGATACTTTAAGGAAATTCGATGGCAAGGAATTTAGGCAGTTACTACCAGGAGAATATACTCAAATGGCTGGTCGTGCTGGAAGAAGAGGTCTTGATAAGATTGGTACTGTTGTTCTAATGTGCCGTGATGAAATCCCTGAAGATAGGGATTTGAAGCATGTTATTGTTGGAAATGCAACCCGCCTTGAATCTCAATTTCGGCTTACCTATATTATGATCCTCCATCTCCTTCGAGTTGAAGAATTGAAGGTAGAAGATATGCTTAAAAGAAGTTTTGCTGAATTCCATGCTCAGAAAAAACTACCTGAAATGCAAGAACTTTTGAAGCGAAAGCTTAATCAGCCTACAAAAGTTATTGAATGCATAAAGGGCGAGCCAACCATCGAGGAATACTATGAGACATACTCAGAAGCTGAGAAGTACGGTAGCAAAATATCAGATGCAATTTTGCAGTCTTCTAATGCCCAACAATTTCTTGCTCCTGGAAGAGTAATAGTAGTAAAATCAGAATCAGCCAATGATCATTTGCTTGGTGTGATTGTGAAAGCTCCTTCTGCAAATTGTAAGCAATATATTGTTTTAGTGCTCAGGCCTGATTTGCCATCCCCAGGGGAACATGCCCCAAGTAGGGGTAGTGTGCAAGATAAACACGGTGACTTCAACCAGGGTTATTTTGTGGTGCCTAAATCAAAACGTGGTTTTGGAGATGATTATCATACCTCTGTTTCAGCTCGTAGAGGAACAGGTGTTATCAATGTCACACTGCCACATCATGGTTATGTTAGTGGAATGAGTTATGAGGTTCGAGGTGTTGATAGTAAGGAATTTCAATGCATTTGCAATAGCAAAATGAAGATTGACCAAGTTGGACTTCTTGAAGACGTTAGCAATGCTGTTTACTCCAAGACAGTTCAGATGCTCCTGAATTTAAAATCAGATGGAAACAAGTACCCTCCACCCCTGGATCCTGTGAAAGATCTAAAGTTGAAAGATGTTGAACTTGTGGACACATACCGCAAATGGACTAAATTATTGGAGAAGATGACCCGGAATCCATGCCATGGGTGTATAAAATTGGAAGAGCACATGAAGCTAGCGGAAGACATGCAAAAGCACAAACAAGAGGTCACTGATCTTCAATTTAGAATTTCAGACGAAGCACTTCAACAGATGCCAGACTTTCAGGGCCGGATTGATGTTCTGAAGGAAATTGGTTGCATAGATGATGATTTTGTTGTACAAATGAAAGGCCGTGTTGCCTGTGAGATGAACTCTGGCGAGGAATTGATTTGCACTGAATGCTTGTTTGAGAATCAGCTGGATGAACTGGAACCAGAAGAAGCTGTGGCGTTAATGTCTGCCTTTGTGTTCCAGCAGAAAAACACTACTGAACCTTCACTCACAACCAAGCTGTCTGAGGCAAAACATAAGTTGTACAATACGGCTATAAAACTTGGACAACTTCAAGCGCAGAAAGGACTATCAATAGATGCTGAAGAATATGCCCAAGAAAATCTCAAGTTTGGTCTAGTTGAAGTGGTTTATGAATGGGCAAAGGGTACTCCATTTGCAGAAATCTGTGAGCTCACAGATGTTCCTGAAGGCTTGATAGTGAGGACCATTGTGAGACTAGACGAGACATGTCGAGAGTTCAAGAATGCTGCAGCGATTATGGGTAATTCTGCTCTCTGCAAGAAAATGGAAGTTGCTTCTAATGCAATTAAGCGTGACATTGTTTTTGCAGCTAGCCTGTACATAACTGGTGTATGA 4218 0.4265 MAFTKPYFCLYFHYEVQKCLKLLLPKNKETLAYGTFISLCTREKSNPPWNCPTEGYAKRSVKMDPIGAWKELGFRVGFTGHSGHLRVEPLTTVERSNPLSSLPDFILPPAFPEETPESIKKYIEETYLTPRLDPDDFSPEKVGRQWEFDWFDRAEVPLEPSLPRTVVVPVWEPPFRRQNNVSEQGKWEPKSEEVDVSELMLGDEDSGPLPRASGSAKDFVRGSINSRPFHPGGLDNSQTLNRILPEGASNGEWVREILNGGPPQTIPPGFKQGLDLGAFKPYPCSWNVYKDASSLESSSDEKLSELSLQFDDLFKKAWEDGVTHEQEEDGHLSEVESVVLEAEVDKAEASSSMHEDEFSLDEVLSIKSEGSKLLLDASGDCGRQPKEAWARRGGSKEIIDHFYELVPDMALQFPFDLDAFQKEAIYYLEKGESVFVAAHTSAGKTVVAEYAFALASKHCTRAVYTAPIKTISNQKYRDFCGKFDVGLLTGDVTLRPEASCLIMTTEILRSMLYRGADIIRDIEWVIFDEVHYVNDAERGVVWEEVIIMLPRHINIILLSATVPNTVEFADWIGRTKQKEIRVTGTTKRPVPLEHCLFYSGELYKICESETFLLQGLKAAKDAFKKKNTTAVGGGSGRYSGTSAGHDGTQVQKRENAARLKHGSSFSKASRGYQNNGNGQNNWELRRGEASIWLMLINKLSKKSLLPVVIFCFSKNRCDKSADNMTGTDLTSSSEKSEIRVFCDKAFSRLKGSDRNLPQVVRVQNLLHRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPARTVVFDTLRKFDGKEFRQLLPGEYTQMAGRAGRRGLDKIGTVVLMCRDEIPEDRDLKHVIVGNATRLESQFRLTYIMILHLLRVEELKVEDMLKRSFAEFHAQKKLPEMQELLKRKLNQPTKVIECIKGEPTIEEYYETYSEAEKYGSKISDAILQSSNAQQFLAPGRVIVVKSESANDHLLGVIVKAPSANCKQYIVLVLRPDLPSPGEHAPSRGSVQDKHGDFNQGYFVVPKSKRGFGDDYHTSVSARRGTGVINVTLPHHGYVSGMSYEVRGVDSKEFQCICNSKMKIDQVGLLEDVSNAVYSKTVQMLLNLKSDGNKYPPPLDPVKDLKLKDVELVDTYRKWTKLLEKMTRNPCHGCIKLEEHMKLAEDMQKHKQEVTDLQFRISDEALQQMPDFQGRIDVLKEIGCIDDDFVVQMKGRVACEMNSGEELICTECLFENQLDELEPEEAVALMSAFVFQQKNTTEPSLTTKLSEAKHKLYNTAIKLGQLQAQKGLSIDAEEYAQENLKFGLVEVVYEWAKGTPFAEICELTDVPEGLIVRTIVRLDETCREFKNAAAIMGNSALCKKMEVASNAIKRDIVFAASLYITGV 1405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g0694 1405 Gene3D - 380 588 IPR027417 -
Alju07g0694 1405 FunFam DExH-box ATP-dependent RNA helicase DExH11 880 947 - -
Alju07g0694 1405 FunFam Ski2 ATP-dependent RNA helicase 1177 1402 - -
Alju07g0694 1405 CDD SF2_C_Ski2 695 858 - -
Alju07g0694 1405 SMART ultradead3 413 593 IPR014001 -
Alju07g0694 1405 Pfam rRNA-processing arch domain 901 1201 IPR025696 -
Alju07g0694 1405 SMART DSHCT_2 1224 1402 IPR012961 -
Alju07g0694 1405 Pfam DEAD/DEAH box helicase 420 567 IPR011545 GO:0003676|GO:0005524
Alju07g0694 1405 Gene3D - 589 879 IPR027417 -
Alju07g0694 1405 SMART helicmild6 760 846 IPR001650 -
Alju07g0694 1405 FunFam ATP-dependent RNA helicase SKI2 381 588 - -
Alju07g0694 1405 Pfam DSHCT (NUC185) domain 1228 1397 IPR012961 -
Alju07g0694 1405 Gene3D - 1179 1402 - -
Alju07g0694 1405 Gene3D - 880 944 - -
Alju07g0694 1405 FunFam DExH-box ATP-dependent RNA helicase DExH11 589 879 - -
Alju07g0694 1405 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 429 859 IPR027417 -
Alju07g0694 1405 Pfam Ski2 N-terminal region 141 280 IPR040801 -
Alju07g0694 1405 PANTHER ATP-DEPENDENT RNA AND DNA HELICASE 318 1386 - -
Alju07g0694 1405 PIRSF SKI2 110 1402 IPR016438 GO:0003723|GO:0003724|GO:0006401
Alju07g0694 1405 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 695 893 IPR001650 -
Alju07g0694 1405 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 425 580 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g0694 Alju-ChrAlju07 10956896 10987539 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju07g0694 07 10956896 10987539 Alju07g0694 07 10956896 10987539 ECH