Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2775 ATGGCCCAAAATCAGAGACGCACAAGCGTCATCGACTTTCTAGGTGAAGAAATCGTGAGAATCATCGCACCAGTATCAATCTGTATGGTTTTGGTCGTCTTATTGGTCTCAATCCTTAATACCAGTACCAGCTCTTCTTCAGCATCAATCTCCAGTGTGGCCACCATTGCATACAGCGAGACCAGCTCAGACTCTTTCTGGGACAAATTCGTAGGCGCCCTTTTGAACTCTTTGGCATTTGTAGCCGTTGTCACTGTTGCAACTTTTGTTTTGGTCCTTCTCTTCTATCTTAGATGCACCAGATTTTTAAAACTATATATGGGGTTCTCTTCTTTTGTTGTATTGGGATTCTTGGGTGGTGACATTGCCCTACTCCTTATTGAAGATTTTAGTATCCCTATTGATTGCATAACATTTTTCCTGGCCTTGTTTAATTTTGCTGTTGTTGGTGTATTGGCTGTCTTGATGTCCAAAATGGCAATTGCTTTGACTCAAGTTGGACCATTAAGACTTTTGGTAGAACTTGCAATCTCAATAGATGAAGAAATTCCTGCACTGGTTTATGAGGCTAGAGCAGTGAACTATGACCAGGTGGATCCAAGGGGTGATGTAACTCAGAGAAGGAGGGTTTGGAGGGATGGGAGGGTTGAGAACTCAAGTCTACCAAGTGATTCCAATCCAAGTATCAATTCTGTGCTAGGTGAAACCCAAAATAGTGAATCAAACTCCAATCTAGATACAATGAATGCTATTAACAGAGATTTGGTCAGTAATACTTCAGATGGAACCCATGAAGACTCAAATTTAGATAGGGAAAATGCTGATGTAAACTCAAATCCTTCTACTAGTTACAGAAATTTGGTGAGAGCTGAAGAGGGACGGGTTATAGAGACCGATTCTGAGATCTCTGAACCATTGATTGGTCATGAAATGAATGTGCAGATCCACAGAGAAGAAGATGCAGTGGCAGGTCAAAGCCTGATGCCAGAGGGGATTGGATTGGGGTCATCTGGAGCAATCAAGCTAGGGTTAGGAGATTTCATTTTCTACAGTGTTTTGGTTGGCAGGGCAGTGATGTATGATTATATGGCAGTGTATGCTTGTTATCTAGCTATCATTGGTGGTCTGGGCATCACTTTGATGCTATTAGCATTATATCAGAAAGCCTTACCGGCTCTTCCAGTGTCAATCATGCTAGGAGTATCCTTTTATTTCTTGACCAGGTTCTTGCTTGAACCATTTGTTTTGCAATGTTCCTTGAACCTCCTTATGTTCTAA 1278 0.4163 MAQNQRRTSVIDFLGEEIVRIIAPVSICMVLVVLLVSILNTSTSSSSASISSVATIAYSETSSDSFWDKFVGALLNSLAFVAVVTVATFVLVLLFYLRCTRFLKLYMGFSSFVVLGFLGGDIALLLIEDFSIPIDCITFFLALFNFAVVGVLAVLMSKMAIALTQVGPLRLLVELAISIDEEIPALVYEARAVNYDQVDPRGDVTQRRRVWRDGRVENSSLPSDSNPSINSVLGETQNSESNSNLDTMNAINRDLVSNTSDGTHEDSNLDRENADVNSNPSTSYRNLVRAEEGRVIETDSEISEPLIGHEMNVQIHREEDAVAGQSLMPEGIGLGSSGAIKLGLGDFIFYSVLVGRAVMYDYMAVYACYLAIIGGLGITLMLLALYQKALPALPVSIMLGVSFYFLTRFLLEPFVLQCSLNLLMF 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2775 425 PANTHER PRESENILIN 163 425 IPR001108 GO:0004190|GO:0016020|GO:0016485
Alju06g2775 425 Gene3D Presenilin 331 417 IPR042524 -
Alju06g2775 425 SMART psh_8 71 411 IPR006639 GO:0004190|GO:0016020
Alju06g2775 425 MobiDBLite consensus disorder prediction 218 263 - -
Alju06g2775 425 FunFam Presenilin 314 416 - -
Alju06g2775 425 MobiDBLite consensus disorder prediction 215 282 - -
Alju06g2775 425 Pfam Presenilin 163 415 IPR001108 GO:0004190|GO:0016020|GO:0016485
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2775 Alju-ChrAlju06 54689679 54691076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2775 1 425 Miscellaneous Gene Families AT2G29900 52.258 3.03e-123 361
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g2775 06 54689679 54691076 Alju06g2775 06 54689679 54691076 ECH