Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2744 ATGTTTGGTTTTAGGAAATCTCCCCTAAAATTTGTTAAACATAGTTCTGTGGAGCCTGTTTATCCTGTTAAATCAGGATCAAATCCATTTGATTCTGATGATGATGAGCCAATGGAAAACCAAAAAGTTAATTCCTCTAATAGGACATCTTCAGACCCTTACCTAGTTTTGCAAGGAGGAAAAACTAACCCTTTTGATGATGATGATGATGATGATGATGATGGATGCGATAGGAATTCTTGTTCATCTTCTCATGCCTTTCAATCAAAGGAAAACCAAAAAGTTAATTCCTCGAATAGGACATCTTCAGACCCTTCCCTAGTTTTGCTAGGAGGAAAAACTAATCCCTTTGATGATGATGGAGGTGACAGGAATTCTTTTTCATCTTCTTATGCCCTTCGATCAGCAAACCAAAACAAGTATATAGAGAATCAATCAGTGCAAGAGTTGGAGAATTATGCTGTTTACAAGGCTGAAGAGACTACAAAATCAGTCAAAAACTGTTTGAAGATAGCGGAGGACATGAGAGAGGATGCTACCAAGACTTTAGTCACTCTACACCAACAGGGTGAGCAGATTACCAGGTCTCACAATGTTGCAGTTGACATCGACCAAGATCTTAGTCGGGGAGAAAAGCTTTTAGGAAGACTTGGTGGCATCTTCTCTAAAACCTGGAAACCAAAGAAGACACGACCAATTACAGGGCCTGTTATTGTTGGAGATGATCAGGTTCAAAGAAAGGGCAGCCACTTGGAGCAGAGACAGAAATTGGGATTGACTTCTGCACCCAGGGGAAAGTCAAACTTTCGAACACCATCTCCTGAGCCAATCAATGCTTTTGAAAAAGCTGAGATTGAAAAGGGGAAACAAGATGATGCATTGTCAGATTTAAGCAATCTCTTGGTAGAGCTGAAAGATATGGCTATTGACATGGGATCTGAAATTGAGAGACACAACAAAGCGCTGGGCCATATGGAAAACGATGTGGACGAGTTGAATTACCGCGTGAAAGGGGCTAATCAACGTGGTCGTCGTTTACTGGGAAAATAA 1050 0.4076 MFGFRKSPLKFVKHSSVEPVYPVKSGSNPFDSDDDEPMENQKVNSSNRTSSDPYLVLQGGKTNPFDDDDDDDDDGCDRNSCSSSHAFQSKENQKVNSSNRTSSDPSLVLLGGKTNPFDDDGGDRNSFSSSYALRSANQNKYIENQSVQELENYAVYKAEETTKSVKNCLKIAEDMREDATKTLVTLHQQGEQITRSHNVAVDIDQDLSRGEKLLGRLGGIFSKTWKPKKTRPITGPVIVGDDQVQRKGSHLEQRQKLGLTSAPRGKSNFRTPSPEPINAFEKAEIEKGKQDDALSDLSNLLVELKDMAIDMGSEIERHNKALGHMENDVDELNYRVKGANQRGRRLLGK 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2744 349 Gene3D - 282 348 - -
Alju06g2744 349 FunFam SNAP25 homologous protein SNAP33 141 218 - -
Alju06g2744 349 FunFam SNAP25 homologous protein SNAP33 281 348 - -
Alju06g2744 349 SMART tSNARE_6 150 217 IPR000727 -
Alju06g2744 349 SMART tSNARE_6 279 346 IPR000727 -
Alju06g2744 349 Coils Coil 315 335 - -
Alju06g2744 349 CDD SNARE_Qc 289 345 - -
Alju06g2744 349 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 284 346 IPR000727 -
Alju06g2744 349 SUPERFAMILY SNARE fusion complex 145 215 - -
Alju06g2744 349 MobiDBLite consensus disorder prediction 80 109 - -
Alju06g2744 349 Gene3D - 140 218 - -
Alju06g2744 349 PANTHER SYNAPTOSOMAL ASSOCIATED PROTEIN 28 349 - -
Alju06g2744 349 SUPERFAMILY SNARE fusion complex 287 347 - -
Alju06g2744 349 MobiDBLite consensus disorder prediction 42 57 - -
Alju06g2744 349 MobiDBLite consensus disorder prediction 15 129 - -
Alju06g2744 349 CDD SNARE_SNAP25N_23N_29N_SEC9N 152 215 IPR044766 GO:0005484|GO:0031201
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2744 Alju-ChrAlju06 54407864 54410247 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g2744 06 54407864 54410247 Alju06g2744 06 54407864 54410247 ECH