Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2670 ATGAGAGATTTCAAGAGGCTGCAACAAGATCCACCTGCAGGAATCAGTGGTGCGCCTCAGGACAACAATATAATGCTCTGGAATGCTGTAATATTTGGTCCTGATGATACTCCATGGGACGGAGGAACGTTTAAACTAACTCTCCAATTTTCGGAGGATTATCCAAATAAACCACCAATGGTGCGATTTGTCTCCCGAATGTTTCATCCTAATATTTATGCGGATGGGAGTATTTGTTTGGATATATTGCAAAATCAGTGGAGCCCCATATATGATGTAGCTGCAATACTAACATCTATCCAGTCACTGCTTTGTGATCCAAACCCAAATTCCCCTGCAAACTCAGAAGCTGCTCGGATGTTCAGTGAGAACAAGCGTGATTACAACAGAAGAGTGAGGGAGATTGTGGAGCAGAGCTGGACGGCTGACTAA 432 0.4375 MRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFSEDYPNKPPMVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKRDYNRRVREIVEQSWTAD 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2670 143 CDD UBCc 1 136 IPR000608 -
Alju06g2670 143 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 1 141 IPR000608 -
Alju06g2670 143 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 2 140 - -
Alju06g2670 143 SMART ubc_7 1 141 - -
Alju06g2670 143 MobiDBLite consensus disorder prediction 1 20 - -
Alju06g2670 143 FunFam Ubiquitin-conjugating enzyme E2 2 1 139 - -
Alju06g2670 143 SUPERFAMILY UBC-like 1 141 IPR016135 -
Alju06g2670 143 Pfam Ubiquitin-conjugating enzyme 2 135 IPR000608 -
Alju06g2670 143 Gene3D Ubiquitin Conjugating Enzyme 1 140 IPR016135 -
Alju06g2670 143 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 68 83 IPR023313 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2670 Alju-ChrAlju06 53740513 53743488 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2670 2 111 Miscellaneous Gene Families AT1G17280 29.565 5.66e-14 64.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g2670 06 53740513 53743488 Alju06g2670 06 53740513 53743488 ECH