Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2616 ATGCTTTCTGATTCAATCACCACCGCTCCGATTCCTTCAGCCGCAAACGCCAAGAACCTGGGCAAGAAAAAAAGGACCAACAGGTCTGCTAAACTAAAGCAATGTAAGATTGATGCCCGTCGCGAGCAGTGGCTTTCTCAAGTTATGGTCAACAATAAGAAATGCAAGGACGGAGGGGACGATGGCCGCGCGCCCCCGATGCCTGTAGGGGAAGACAGTAAACGTTCATGGGAGAAATTGGAGATGAGTCCTAGAGCTGAAGAGATTGAGGGATCGATCCTTCAAGATGGCTACATGGAATCTCTATCCAATAGTCCCTCCAGTGTTGATAGTAGCATGTTGGGGAGTAATGATTCAGGAAGAAATTTCTCTGGGAGTAGCAGCGGCAGCAGCGCCGGGTCCTGCTCTGGTAATGTCACAGAAGAAGAAGGCGATGATGATTGCTTGGATGATTGGGAAGCTGTGGCTGATGCTTTAGCTGCCGATGACAAGCATCAAAGTCCATGTTCGGAGCTGCCCCACGCTCAAGAACCAGTAGTGCGAATGGTTTCGCCTCGTGAAATGACTCATGGGTTGAATTTAGGTGCAGGGAATTCTAAAACCGAGAGTGATAGAATAGTTTCATCGGCCTCTGGCAACAGCCGAGCCTGGAGGCCTGATGATGCTTTTCGTCCTCAGAGTCTTCCTAATCTATCTAAGCAGTATAGTTTACCAAATCCAGACTCTCGTAGTGGAGGAGGGATCCCATGGGCTCGCCCTGCTGCGCCTTCCCCTTGCCCAATATGCTGTGAGGACCTTGACTTGACAGATTCATGTTTTTTACCTTGCTTGTGTGGATTTCGGCTTTGCCTCTTCTGTCACAAGAGGATTCTTGAGCAGGATGGCCGCTGCCCTGGGTGCAGGAAGCCTTATGATTGCAAATCTGTGGAACCAGAGGCAAATGTCCATGGAGGCAGCCTGACTCTTCGTTTGGAGCGCTCTCGTAGCATGATTTATAGGGCATAA 1005 0.4985 MLSDSITTAPIPSAANAKNLGKKKRTNRSAKLKQCKIDARREQWLSQVMVNNKKCKDGGDDGRAPPMPVGEDSKRSWEKLEMSPRAEEIEGSILQDGYMESLSNSPSSVDSSMLGSNDSGRNFSGSSSGSSAGSCSGNVTEEEGDDDCLDDWEAVADALAADDKHQSPCSELPHAQEPVVRMVSPREMTHGLNLGAGNSKTESDRIVSSASGNSRAWRPDDAFRPQSLPNLSKQYSLPNPDSRSGGGIPWARPAAPSPCPICCEDLDLTDSCFLPCLCGFRLCLFCHKRILEQDGRCPGCRKPYDCKSVEPEANVHGGSLTLRLERSRSMIYRA 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2616 334 MobiDBLite consensus disorder prediction 189 249 - -
Alju06g2616 334 MobiDBLite consensus disorder prediction 50 84 - -
Alju06g2616 334 MobiDBLite consensus disorder prediction 99 146 - -
Alju06g2616 334 FunFam RING/U-box superfamily protein 252 317 - -
Alju06g2616 334 MobiDBLite consensus disorder prediction 194 215 - -
Alju06g2616 334 ProSiteProfiles Zinc finger RING-type profile. 259 301 IPR001841 -
Alju06g2616 334 MobiDBLite consensus disorder prediction 99 138 - -
Alju06g2616 334 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX RELATED 255 315 IPR039780 GO:0004842|GO:0030014
Alju06g2616 334 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 253 316 IPR013083 -
Alju06g2616 334 MobiDBLite consensus disorder prediction 1 33 - -
Alju06g2616 334 Pfam RING/Ubox like zinc-binding domain 259 305 - -
Alju06g2616 334 CDD mRING-HC-C4C4_CNOT4 259 302 IPR039515 -
Alju06g2616 334 MobiDBLite consensus disorder prediction 227 241 - -
Alju06g2616 334 SUPERFAMILY RING/U-box 257 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2616 Alju-ChrAlju06 53167287 53168521 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g2616 06 53167287 53168521 Alju06g2616 06 53167287 53168521 ECH