Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2586 ATGAATGATGGGTCCTCACTTGTCAATCTCATGATGATGAAGGAGGGGAAAAAAAAGAGAGAGTATTTATTGAGGAGTGAGAAATACTTCCGGTCTCCACCTCCTCCCGCTCCCTCTGTCATCAGTCCCTGCGCCAGCACCCGGCCACCGTCGCGGAAGCATCAATTTTCACCGCTTCATCATCACCTTCATACTTTTCTTGCCGATTTTGTTTGCGGAATTGGTACAAATTTGATAAAAACCAAAAAAGATTCTTTGCAATACCAAGACATGGGGCACAGCAAGCGAAAGAGAGGCCGCAAACCAAAAAATCCTACTACAGAAATCCTAGACTTGCCTACCACTAGCACTGCCCCTAATAGCGAGGGCAAAAACCCTTCTACTAAGGATGATGTCTCCTCTGTTGGCAATGTTGACCTAATTGAAAACACTACCTCTCCACACTACCGTTGCCGACACAAGAAGTCAACCAATCACTCTGACAAGTTTGACAAGGCACCTGCAACTTCTACTGCTAGACAGCTCACCCATTCTGCTGACAGTGATGGAGATTTTACTGTTCCTGGTGATACGGGGGGTTCTGGGGCAGTAGCGATGGGCATGGAAGTGGATCCAGAGTGGGAGAGTGTTTCTGGTGACAATGATGGAGATTTTACTGTTCCTGTTCATTCAGGGGGTTCCAGGGCAATAGTGATGGGCATGGAAGCGGAACCAGTGTGGGAGAGTGTTTCGGCAAGAGTGGTGCTGGCAATGGACTCTGTTGTTAAGGTGTTTTGTGTACACTCACAACCAAATTTTTCACTGCCGTGGCAGAGGAAAAGGCAGTACAGCTCTAGCAGTAGTGGGTTCGTTATCAGCGGGAGGAGGGTGCTCACCAACGCCCATTCAGTGGAGCACTACACCCAAGTCAAGCTCAAGAAACGTGGTTCCGATACCAAATACTTGGCCACTGTGCTGGCCATTGGGACCGAGTGTGACATTGCCATGCTTACTGTTGAAGATGATGAATTTTGGCATGGAATGTCACCTGTAGAGTTCGGGGATTTGCCCGCACTGCAAGATGCAGTTATTGTTGTTGGTTATCCTATTGGTGGTGACACTATTTCAGTGACTAGTGGCGTTGTATCTCGCATTGAGATTCTATCTTATGTCCATGGTTCTGCTGAACTTCTAGGATTGCAGATAGATGCTGCTATAAACTCAGGTAATTCTGGTGGGCCTGCATTTAATGATACGGGAAATTGTGTGGGAATTGCATTTCAGTCCATCAAACATGAAGATGTAGAAAATATAGGTTATGTCATTCCAACACCAGTTATCATGCATTTCATCCATGATTATGAGAAGAATGGAGCATATACAGGATTCCCTGTCCTTGGGATTGAGTGGCAGAAAATGGAAAATCCTGATCTGAGAATGGCAATGGGCATGAGCTCTAATCAGAAGGGGGTACGTATTAGAAGAATAGATCCAACTGCTCGAGAATATAGTGTTTTGAAACCATCAGATGTTATTCTTAGCTTTGACGGGGTTGATGTCGCCAATGATGGGACAGTTCCTTTTCGCCTTGGAGAGCGCATGAATTTCAGTTATATTATATCTCAGAAATACACTGAGGGTAAAGCAGTAATCAAAGTGTTGCGAAATTCGGAGATCTTCAAATTTGACATTAAACTTGGTAGTCACAAAAAGCTCATTCCGGCACATAGCAAGGGCAGGTCTCCCTCATATTATATCATTGCAGGATTTGTTTTTACAACTGTCTCAGTTCCATATCTTCGTTCTGAGTATGGAAAGGATTATGAATTCGACGCTCCGGTCAAGCTTTTGGATAAACTTCTACATTCAATGCCAGAGTCACCAGACGAGCAACTTGTTGCGGTCTCTCAGGTACTGGTAGCTGATATAAACATTGGGTATGAAGATATTGTTAATACTCAGGTACTTGCTTTTAATGGTGAACCTGTTAAAAACCTGAAGAGCTTGGCCAGCATGGTTGAGAACTGCAATGATGAATATCTAAAATTCAATCTAGAGTATGATCAGATAGTGGTGCTTCGTACAGCTACGGCTAAAGCTGCTACTCTTGATATTCTTGCCACCCACTGCATTCCGTCAGCCATGTCCGACGATCTCAAGGAATGA 2145 0.4457 MNDGSSLVNLMMMKEGKKKREYLLRSEKYFRSPPPPAPSVISPCASTRPPSRKHQFSPLHHHLHTFLADFVCGIGTNLIKTKKDSLQYQDMGHSKRKRGRKPKNPTTEILDLPTTSTAPNSEGKNPSTKDDVSSVGNVDLIENTTSPHYRCRHKKSTNHSDKFDKAPATSTARQLTHSADSDGDFTVPGDTGGSGAVAMGMEVDPEWESVSGDNDGDFTVPVHSGGSRAIVMGMEAEPVWESVSARVVLAMDSVVKVFCVHSQPNFSLPWQRKRQYSSSSSGFVISGRRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIGTECDIAMLTVEDDEFWHGMSPVEFGDLPALQDAVIVVGYPIGGDTISVTSGVVSRIEILSYVHGSAELLGLQIDAAINSGNSGGPAFNDTGNCVGIAFQSIKHEDVENIGYVIPTPVIMHFIHDYEKNGAYTGFPVLGIEWQKMENPDLRMAMGMSSNQKGVRIRRIDPTAREYSVLKPSDVILSFDGVDVANDGTVPFRLGERMNFSYIISQKYTEGKAVIKVLRNSEIFKFDIKLGSHKKLIPAHSKGRSPSYYIIAGFVFTTVSVPYLRSEYGKDYEFDAPVKLLDKLLHSMPESPDEQLVAVSQVLVADINIGYEDIVNTQVLAFNGEPVKNLKSLASMVENCNDEYLKFNLEYDQIVVLRTATAKAATLDILATHCIPSAMSDDLKE 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2586 714 CDD PDZ_serine_protease 457 557 - -
Alju06g2586 714 MobiDBLite consensus disorder prediction 29 55 - -
Alju06g2586 714 MobiDBLite consensus disorder prediction 108 136 - -
Alju06g2586 714 PRINTS HtrA/DegQ protease family signature 282 294 IPR001940 GO:0004252|GO:0006508
Alju06g2586 714 PRINTS HtrA/DegQ protease family signature 310 330 IPR001940 GO:0004252|GO:0006508
Alju06g2586 714 PRINTS HtrA/DegQ protease family signature 498 510 IPR001940 GO:0004252|GO:0006508
Alju06g2586 714 PRINTS HtrA/DegQ protease family signature 352 376 IPR001940 GO:0004252|GO:0006508
Alju06g2586 714 PRINTS HtrA/DegQ protease family signature 389 406 IPR001940 GO:0004252|GO:0006508
Alju06g2586 714 FunFam Protease Do-like 9 231 337 - -
Alju06g2586 714 Gene3D - 338 449 IPR043504 -
Alju06g2586 714 MobiDBLite consensus disorder prediction 87 136 - -
Alju06g2586 714 Gene3D - 456 564 IPR036034 GO:0005515
Alju06g2586 714 Gene3D - 234 337 IPR043504 -
Alju06g2586 714 PANTHER - 147 712 - -
Alju06g2586 714 Gene3D - 565 714 IPR046449 -
Alju06g2586 714 MobiDBLite consensus disorder prediction 163 181 - -
Alju06g2586 714 Pfam Trypsin-like peptidase domain 281 418 - -
Alju06g2586 714 SUPERFAMILY Trypsin-like serine proteases 249 451 IPR009003 -
Alju06g2586 714 MobiDBLite consensus disorder prediction 150 188 - -
Alju06g2586 714 SUPERFAMILY PDZ domain-like 482 569 IPR036034 GO:0005515
Alju06g2586 714 Pfam PDZ domain 566 711 IPR041517 -
Alju06g2586 714 FunFam protease Do-like 9 339 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2586 Alju-ChrAlju06 52895947 52903240 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g2586 06 52895947 52903240 Alju06g2586 06 52895947 52903240 ECH