Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2583 ATGTTGTGGAGGCGAAGAAAAGAAACGGATATAACTAAATTGCTGATGAGGGATTTTAAAGTGATGAGAGAAGATAGCCTTGATACGTTTGAAGTCGTGTTTCATGGTCCAGAAAAGAGCCCTTACGAAGGTGGAGTCTGGAGAATTCGTGTTGATATTTCACATGAATATCCATTCGAACCCCCCAAATTGTTTTTTGTGAATTGCATATTTCACCCAAATATTGATTTTGTAAGTGGTTTGATATGCTCGGATTGTCTTTACTGGGATTATCTTGACAAAGGCTGGAGTCCAATAAATGATCTTGTATTAATCTTTCAATACTATATTCCACGACTCTTGTTTGATCCAAATCTTGAAAGTCCTGCAAATCTTGATGCAGCAGAGTTGCTTGAACAGGATGAATGGGAGTATAAACAAGTTGTCAGAGAATATTGTGAAATGTTTGCAATTGTGGAAGACAAGCTATCTGAAAATTCATCAGGCTATGAAGACAGTGGAAGTGAGGAGTATATCAGTGAAGAAGGAAGCGGATAA 537 0.3762 MLWRRRKETDITKLLMRDFKVMREDSLDTFEVVFHGPEKSPYEGGVWRIRVDISHEYPFEPPKLFFVNCIFHPNIDFVSGLICSDCLYWDYLDKGWSPINDLVLIFQYYIPRLLFDPNLESPANLDAAELLEQDEWEYKQVVREYCEMFAIVEDKLSENSSGYEDSGSEEYISEEGSG 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2583 178 SMART ubc_7 2 151 - -
Alju06g2583 178 Gene3D Ubiquitin Conjugating Enzyme 2 163 IPR016135 -
Alju06g2583 178 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 19 144 - -
Alju06g2583 178 MobiDBLite consensus disorder prediction 159 178 - -
Alju06g2583 178 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 1 151 IPR000608 -
Alju06g2583 178 Pfam Ubiquitin-conjugating enzyme 15 145 IPR000608 -
Alju06g2583 178 CDD UBCc 4 146 IPR000608 -
Alju06g2583 178 SUPERFAMILY UBC-like 21 151 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2583 Alju-ChrAlju06 52867872 52869276 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g2583 06 52867872 52869276 Alju06g2583 06 52867872 52869276 ECH