Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2530 ATGTCATCGACGCCGGCGAGAGATAACGGGATCTTTAGCCGGATGGCGAGCCTTCCTCGGAGCATAATGGGGGAATTTTCAAGGGCCATGAGTGATATAGGATCAGGAAGAAGTAGACGACGATCAAGAAATCAAAACGAATTACTCTCTTCTTCATCTTCAGATTTCCAGTTCCAGCCATTTGAGCCGTTGGATCCACCGGCGGCGGTTGGGGAGGATCAGTGGGCTTTTCTGGAGAGTTTTGAGCTTCAATACGGCACCGTTCATCCTTTCTTCTACGCCTGCCGTTTAATGGAAGTTCTGAAACTTGCAGAGCATGACAAGAAGTTGGTGTTCATGTACATCCATTCACCTGAACACCCTTTCACGCACAATTTCTGTAGAGAAACACTGTGTAGTGAGCTTGTCACTGAGTTTCTTGACGTCAACTTTATTTGCTGGGGAGCTCTCTCCGATTGCAGCGAAGGTATGCGTATGGTGGCCACTCTCCGTCCTGCTAGCCTTCCCCTCTGCGCCGTCGTCGTCCCTGCCACCGGCGATTCCATGGTGGTTCTGCAACAGATAGAAGGGCCGGTTTCAGCGGCGGAGCTAGTGGAAGTTTTACAGAGAACAATGGAGGAGCAAGGATCGGCTTTTGGAAGTGACAGAGCTCGGCGGGAAGAAATGATTAGAGCTGATCGTCGGATAAGAGAAGAACAAGATGCTGCATATCTTGCAGCTCTGAGGATTGACAAGGGAAAAGAAAAACTCAGGAATTCAACTTCAAAAACAGAAAGAATTCAGAAACCAGTAGAAGCATTGAACTCCAGAAATTATGAGAAGCCTAAGAAAAACAATTCTGTGAGCAAAGACAGCTCTAAAGTGAATGAACATACTACCGCTGCGCAAAATCAAAACAAAGGAGTTCCAAATCGGACGGCCCTGTCTCAACCCACTCAGATATTGATAAGGTTTCCAAATGGGCAAAGAAGGGAGCAGAGATTTGATTGCACTGACAAAATCCAAGCAATTTTTGCATTCATTGATTCACTGGGAATGCCTGGGATTGGCAACTACAGATTGGTGTCAAACTTCCCAAGAAGAGTGTATGGCGTTGATCAGATGAGAATGACACTCAAAGATGCGGGCTTCCATCCCCAAGCTAGCCTTTTCCTCGAGCCCATACTCGCTGACCCATAG 1179 0.4724 MSSTPARDNGIFSRMASLPRSIMGEFSRAMSDIGSGRSRRRSRNQNELLSSSSSDFQFQPFEPLDPPAAVGEDQWAFLESFELQYGTVHPFFYACRLMEVLKLAEHDKKLVFMYIHSPEHPFTHNFCRETLCSELVTEFLDVNFICWGALSDCSEGMRMVATLRPASLPLCAVVVPATGDSMVVLQQIEGPVSAAELVEVLQRTMEEQGSAFGSDRARREEMIRADRRIREEQDAAYLAALRIDKGKEKLRNSTSKTERIQKPVEALNSRNYEKPKKNNSVSKDSSKVNEHTTAAQNQNKGVPNRTALSQPTQILIRFPNGQRREQRFDCTDKIQAIFAFIDSLGMPGIGNYRLVSNFPRRVYGVDQMRMTLKDAGFHPQASLFLEPILADP 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2530 392 SUPERFAMILY Ubiquitin-like 309 388 IPR029071 -
Alju06g2530 392 MobiDBLite consensus disorder prediction 45 59 - -
Alju06g2530 392 Gene3D Glutaredoxin 69 211 - -
Alju06g2530 392 MobiDBLite consensus disorder prediction 32 60 - -
Alju06g2530 392 SUPERFAMILY Thioredoxin-like 73 210 IPR036249 -
Alju06g2530 392 SMART ubx_3 303 387 IPR001012 GO:0005515
Alju06g2530 392 CDD UAS 97 207 - -
Alju06g2530 392 Gene3D - 311 388 - -
Alju06g2530 392 PANTHER FAS-ASSOCIATED PROTEIN 5 388 - -
Alju06g2530 392 ProSiteProfiles UBX domain profile. 307 385 IPR001012 GO:0005515
Alju06g2530 392 SMART 45neu3 76 202 IPR006577 -
Alju06g2530 392 MobiDBLite consensus disorder prediction 249 305 - -
Alju06g2530 392 CDD UBX 314 386 - -
Alju06g2530 392 MobiDBLite consensus disorder prediction 269 284 - -
Alju06g2530 392 MobiDBLite consensus disorder prediction 285 305 - -
Alju06g2530 392 Pfam UBX domain 310 386 IPR001012 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2530 Alju-ChrAlju06 52323533 52325053 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g2530 06 52323533 52325053 Alju06g2530 06 52323533 52325053 ECH