Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2458 ATGGGAATGAAGAAGTTCTTAGTTGTTTCTATCTTAGTAGCTCTGGTTCTTGGTGTTGCAGAGAGCTTTGATTTGCACGAGAAAGATTTGGAATCTGAGGAAAATTTGTGGGACTTGTACGAGAGATGGAGGAGCCATCACACTGTTTCTAGAAGCCTAAGTGAGAAACACAAGAGATTCAATGTGTTCAAAGCCAATGCGATTCATGTTCATAACACCAACAAGATGGACAAGCCTTACAAGCTCAAATTGAACCGGTTCGCCGACATGACCAACCTTGAGTTCCAGAATGCCTACGCTTCCTCAAAGATCAACCACCATAGAATGTTCCGTGGCACGCCACGTGGCGGGAATGGAACCTTCATGTACGAGAAAGTTGATAGAGTTCCTCCTTCACTTGATTGGAGGAAGAAAGGTGCTGTCTCTGCTATAAAGGATCAAGGCCAATGTGGTAGTTGTTGGGCATTTTCAGCTGTTGCAGCTGTGGAAGGTATTAATCAGATAAAAACAAAGAAGCTAGTCTCATTGTCTGAGCAAGAGTTGGTAGACTGTGACACTGAAAAAAATGAAGGATGCAATGGAGGGCTAATGGAATATGCTTATGAGTTCATCAAGCGAATTGGGGGGTTAACAACAGAAAGCAATTATCCCTATAAAGCCATAGAGGAAACCTGCGATGTCTCAAAGGAGAAGCATCCATCAGTGTCAATTGATGGTCATGAAAATGTCCCTCCAAATGATGAGAACTCATTGCTCAAAGCTGCTGCAAACCAGCCTGTCTCTGTAGCCATAGATGCTGGAGGATCTGATTTGCAATTCTACTCACAGGGAGTATTTACTGGAGAATGTGGGAAACAACTGAATCATGGAATAGCTATTGTGGGATATGGAACAACTATTGATGGGACTAAATATTGGATAGTTAAGAATTCTTGGGGCACTAAATGGGGAGAGCAAGGTTACATAAGGATGCAGAGGGCTCTCCACCAGAAGGAAGGACTTTGTGGCATAGCAATGGAAGCTTCTTATCCAATTAAAAACTCCTTCACTAGCCCTGAAGGAGACCAATCATCTTATAAAGACGAGCTTTGA 1092 0.4286 MGMKKFLVVSILVALVLGVAESFDLHEKDLESEENLWDLYERWRSHHTVSRSLSEKHKRFNVFKANAIHVHNTNKMDKPYKLKLNRFADMTNLEFQNAYASSKINHHRMFRGTPRGGNGTFMYEKVDRVPPSLDWRKKGAVSAIKDQGQCGSCWAFSAVAAVEGINQIKTKKLVSLSEQELVDCDTEKNEGCNGGLMEYAYEFIKRIGGLTTESNYPYKAIEETCDVSKEKHPSVSIDGHENVPPNDENSLLKAAANQPVSVAIDAGGSDLQFYSQGVFTGECGKQLNHGIAIVGYGTTIDGTKYWIVKNSWGTKWGEQGYIRMQRALHQKEGLCGIAMEASYPIKNSFTSPEGDQSSYKDEL 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2458 363 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 31 343 IPR013128 GO:0008234
Alju06g2458 363 FunFam Senescence-specific cysteine protease SAG39 20 346 - -
Alju06g2458 363 CDD Peptidase_C1A 130 344 IPR039417 -
Alju06g2458 363 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 147 158 IPR000169 -
Alju06g2458 363 Pfam Cathepsin propeptide inhibitor domain (I29) 40 95 IPR013201 -
Alju06g2458 363 Pfam Papain family cysteine protease 129 345 IPR000668 GO:0006508|GO:0008234
Alju06g2458 363 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 287 297 IPR025660 -
Alju06g2458 363 Gene3D Cysteine proteinases 14 347 - -
Alju06g2458 363 SUPERFAMILY Cysteine proteinases 35 346 IPR038765 -
Alju06g2458 363 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 305 324 IPR025661 -
Alju06g2458 363 PRINTS Papain cysteine protease (C1) family signature 305 311 IPR000668 GO:0006508|GO:0008234
Alju06g2458 363 PRINTS Papain cysteine protease (C1) family signature 289 299 IPR000668 GO:0006508|GO:0008234
Alju06g2458 363 PRINTS Papain cysteine protease (C1) family signature 147 162 IPR000668 GO:0006508|GO:0008234
Alju06g2458 363 SMART Inhibitor_I29_2 40 95 IPR013201 -
Alju06g2458 363 SMART pept_c1 129 345 IPR000668 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2458 Alju-ChrAlju06 51600561 51602647 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g2458 06 51600561 51602647 Alju13g1645 13 34612956 34614403 CCT
Alju06g2458 06 51600561 51602647 Alju06g2458 06 51600561 51602647 ECH