Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2393 ATGCATATCGGACGAATGAGATTTGCTCAGATATCCAGGGAGTTAGAACTCAAGTATGCCTATCGGACGGATGAGATTCCTCACACATTAGGGTTTCTTTCTTCAATGGCTCTTTACCTTCTCTACGAATCCGCTTCTGGCTACGCCCTATTCCATGCTCATGGCCTCGATGAGATTGGGCAGAACACCGAAGCGGTTCGGAACTCTGTTTCCGACTTGAACCGCTTCGGCAAGGTCGTGCAGCTTGCGGCATTTTCTCCTTTCCAATCGGCTCTTGATGCTCTTAAGCAATGCAACTCTGTTTCTGAAGGTCTGTTGACTGATGAACTGAGAAGTTTTCTGGAGATTAATCTTCCAAAAGTTAAGGAAGGCAAGAAGGCGAAGTTCAGTTTAGGTGTAGTAGATCCTAAGATTGGTTCTCAGATTTCTGAAGTGTCTAAAATTCCATGTCAAAGTAATGAGTTTGTGGGTGAGCTGCTTCGAGGCGTTCGGCTCCATTTTGATAGATTTCTCAATGATCTCAAGCCCGGAGATTTGGAAAAAGCTCAACTTGGTCTGGGGCATAGTTACAGCAGGGCAAAAGTGAAATTTAATGTTAACCGAGTTGACAATATGGTCATTCAAGCAATCTTCCTTCTTGACACACTTGATAAAGATATCAATTCTTTTTCCATGAGAGTCAGGGAATGGTACTCGTGGCATTTTCCTGAACTGGTGAAGATTGTAAATGACAATTATCTATATGCCAGAGTTGCAAAATATATTGAAGATAAGTCAAGGCTGTATGAGGACAAAATCTCAGGCTTAACAGACATAGTTGGAGATGAAGACAAGGCAAAAGAGATTGTGGAAGCTGCCAAGGCATCTATGGGGCAGGATTTGTCTCCCGTGGACCTAATCAATGTCCAGCAATTTGCTCAAAGGGTAATGGACCTATCTGAGTATAGGAGGAAGCTTTATGATTATCTTGTTACTAAGATGAATGATATTGCACCAAATTTGGCCTCTTTGATTGGTGAAGTTGTTGGCGCTCGATTGATTTCACATGCTGGAAGCCTCACTAATTTGGCCAAGTGCCCGTCTTCTACTCTTCAAATTCTTGGTGCAGAGAAGGCTTTGTTCAGGGCATTGAAAACCAGAGGCAATACTCCCAAATACGGTCTGATATTCCACTCATCCTTTATTGGTCGAGCATCTGCAAAAAACAAAGGCAGAATGGCTCGCTATCTTGCTAATAAGTGTTCAATTGCATCACGCATAGATTGCTTTTCTGAAAGGGGCAGTACAGCTTTTGGAGAGAAACTCCGTGAGCAAGTTGAGGAGCGACTTGACTTTTATGACAAGGGGGTTGCCCCTCGTAAGAACATTGACGTCATGAAGGCTGCTGTTGAAAGTGCTCAAGATAAAGATAATGAGATTGCTACAGAAGCATCTGGCAAGAAGGGCAAAAAGAAGGCAAAAGCTGCTGCTGCAAACGGAGTTGAAGAAATGGCTGTTGATAAGCCCAACGGAGTTGCAAATGGTGATGCACTAGAGGATCACAAATCAGAAAAGAAGAGGAAGAAGAAAGAAAAGAGGAAATTGGACGTGGACACGGAGATGCAGGATGTGGCCGCTCATGATGATGAAAATAATGCCGAGGCAAATGGAGAGGTTAAGAAGAAGAAGAAGAAGAAAGAGAAGAAAGATGACGATGGAGAAGTACAGGACGCTGCTATTAAGACAAAGAAGAAGAAGAAGAAATCCAAAAATGAGGATGATGAGTAA 1767 0.4295 MHIGRMRFAQISRELELKYAYRTDEIPHTLGFLSSMALYLLYESASGYALFHAHGLDEIGQNTEAVRNSVSDLNRFGKVVQLAAFSPFQSALDALKQCNSVSEGLLTDELRSFLEINLPKVKEGKKAKFSLGVVDPKIGSQISEVSKIPCQSNEFVGELLRGVRLHFDRFLNDLKPGDLEKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDTLDKDINSFSMRVREWYSWHFPELVKIVNDNYLYARVAKYIEDKSRLYEDKISGLTDIVGDEDKAKEIVEAAKASMGQDLSPVDLINVQQFAQRVMDLSEYRRKLYDYLVTKMNDIAPNLASLIGEVVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASAKNKGRMARYLANKCSIASRIDCFSERGSTAFGEKLREQVEERLDFYDKGVAPRKNIDVMKAAVESAQDKDNEIATEASGKKGKKKAKAAAANGVEEMAVDKPNGVANGDALEDHKSEKKRKKKEKRKLDVDTEMQDVAAHDDENNAEANGEVKKKKKKKEKKDDDGEVQDAAIKTKKKKKKSKNEDDE 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2393 588 Coils Coil 511 531 - -
Alju06g2393 588 PANTHER NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58 38 582 IPR045056 GO:0030515|GO:0031428|GO:0032040
Alju06g2393 588 Gene3D Nop domain 334 457 IPR042239 -
Alju06g2393 588 ProSiteProfiles Nop domain profile. 330 448 IPR002687 -
Alju06g2393 588 Coils Coil 545 565 - -
Alju06g2393 588 SUPERFAMILY Nop domain 198 447 IPR036070 -
Alju06g2393 588 MobiDBLite consensus disorder prediction 465 588 - -
Alju06g2393 588 Pfam snoRNA binding domain, fibrillarin 212 444 IPR002687 -
Alju06g2393 588 MobiDBLite consensus disorder prediction 507 588 - -
Alju06g2393 588 Gene3D - 176 333 - -
Alju06g2393 588 FunFam Nucleolar protein 56 334 446 - -
Alju06g2393 588 FunFam Nucleolar protein 56 175 333 - -
Alju06g2393 588 SMART NOSIC_2 205 257 IPR012976 -
Alju06g2393 588 MobiDBLite consensus disorder prediction 465 483 - -
Alju06g2393 588 Pfam NOP5NT (NUC127) domain 39 104 IPR012974 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2393 Alju-ChrAlju06 50697180 50701575 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g2393 06 50697180 50701575 Alju06g2393 06 50697180 50701575 ECH