Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2299 ATGAGTCTCACCTATCATCTTCTCAACCTCTTGAAGACACACACTCTCTGCCTCTGCGATTCAGACAGAGAGACCAAACACCGAAGGGCCTGTGGAAGCAGAGATTCTTCATCAATGGAGGCAGAGAAGGTGGACAAGAATCCTAACAAGTCGTCCGCATCGGAGTCTGAAGAAGATTCGGCTAATTTTGAGGATGCAGAAGCAAATCCACAAGTCTTAGTCGGAGACGACGCCGGAAACAGCACTCCAGCTGAGCTCACCAAGATCCCTCTAATGAGAGCTGTCGTTGAAGCCAAGGATCCCTCCGCTAAGGAAGCAGATGATTTGATGATAAGGAGATTCTTGCGTGCTCGTGATTTAGATATAGAGAAATCTGCAGCAATGTTTCTCAAGTACTTGAAATGGAGACGATCATTTGTTCCAAATGGGTTCATATCTGAAACAGAGATTCCCAATGAGTTGGCCCAAGAGAAGGTATACATGCAAGGAGTCGATAAGAAAGGACGACCTATAGTAGTTGCATTTGGTGCTAAACATTATCAAAACCCAGATGGCCTCGATGAATTCAAAAGGCTGGTGGCCTATATTCTTGATAAAGTGACTTCAAGGATACCATCAGGACAAGAAAAGTTTGTAGCTGTTGCAGATCTTAAAGGTTGGAGATATGCAAACAGTGACGTTCGTGGATACATAGCTGCTCTTTCTATTTTGCAGGATTACTTCCCAGAAAGATTGGGGAAGTTGTTTATAGTGCATGCGTCCTCCATATTTATGACAGTTTGGAAGATGATATATCCCTTCATAGATAACAAAACCAAAAAGAAGATAATCTTTGTGGAGAAGAGTAAGATCAAGTCAACACTAATGGAAGAAATAGACGAAAGCCAAATCCCAGATATCTATGGAGGCCAACTTCCATTAGTTCCCATCCAGGATAGCTAA 942 0.4278 MSLTYHLLNLLKTHTLCLCDSDRETKHRRACGSRDSSSMEAEKVDKNPNKSSASESEEDSANFEDAEANPQVLVGDDAGNSTPAELTKIPLMRAVVEAKDPSAKEADDLMIRRFLRARDLDIEKSAAMFLKYLKWRRSFVPNGFISETEIPNELAQEKVYMQGVDKKGRPIVVAFGAKHYQNPDGLDEFKRLVAYILDKVTSRIPSGQEKFVAVADLKGWRYANSDVRGYIAALSILQDYFPERLGKLFIVHASSIFMTVWKMIYPFIDNKTKKKIIFVEKSKIKSTLMEEIDESQIPDIYGGQLPLVPIQDS 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2299 313 PANTHER OS03G0850700 PROTEIN 80 312 - -
Alju06g2299 313 MobiDBLite consensus disorder prediction 29 64 - -
Alju06g2299 313 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 147 309 IPR001251 -
Alju06g2299 313 CDD SEC14 159 304 IPR001251 -
Alju06g2299 313 Gene3D - 75 310 IPR036865 -
Alju06g2299 313 SUPERFAMILY CRAL/TRIO N-terminal domain 78 145 IPR036273 -
Alju06g2299 313 MobiDBLite consensus disorder prediction 29 53 - -
Alju06g2299 313 SMART sec14_4 153 306 IPR001251 -
Alju06g2299 313 Pfam CRAL/TRIO domain 157 303 IPR001251 -
Alju06g2299 313 SUPERFAMILY CRAL/TRIO domain 150 306 IPR036865 -
Alju06g2299 313 SMART CRAL_TRIO_N_2 107 132 IPR011074 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2299 Alju-ChrAlju06 49363597 49369931 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2299 113 276 Acyl Lipid Metabolism Gene Families AT5G47730 25.967 1.33e-12 65.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g2299 06 49363597 49369931 Alju06g2299 06 49363597 49369931 ECH