Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2148 ATGCAGCTCCATACTGTCCCTCGCTCTCCTTGCTCCTCTGGAAGTGTGTTATTTCTGGTGGGTCATCAACTAAGCAAGTGGAAGACTTATAATAGATGTAATTTGGATACTAGATTTTTTGGAAGAAGGTTCTTTCATAAGAATCAGAAGGATAACAAGAGATGTATCTCAAAATGCTATGGTGCACCCATGTTCTGTTCTGCGTCAATTAGGAGTGATTCCTTTATACCTTCTAAAGAGCAACTAAGTAATGCGCGATTGATATATTCCGTTGCTCCAGCCATGGGCCACAACCAGGAATCTCATCCAGAATCACATTTAAGGGTTCCTGCAATTGTGAATGCTCTTGAAGAAATGAAGCTCACTTCAAAGTTCCGGGGTCCTGAGATCACTGAACTTCAAAACTTTGAGCCTGCATCAGTAGATGACGTTGCAAGCGTTCATGCAAGAGCCTATGTATCTGGTCTTGAGATGGCTATGGATCAAGCTTCAGAGAAAGGGCTTATTTTCATAGATGGCTCGGGACCAACATATGCTACAGCCACTACATTTCAGGAGTCATTAGTCGCTGCTGGAGCCGGATTAGCCTTAGTTGACTCAGTGGTTGCAGCTTCAAAGAACAGCCAAGATCCACCCACTGGTTTTGCTTTGATAAGACCGCCTGGACATCATGCTGTTCCACAAGGGCCTATGGGCTTCTGTGTTTTTGGAAATGTGGCCATTGCAGCTCGTTATGCTCAACGTGTACATGGACTAAAGCGTGTGTTTATAATTGATTTTGATGTCCACCATGGGAATGGAACAAATGATGCTTTCTATGATGATCCATATATATTTTTCCTCTCAACTCACCAAGATGGAAGCTACCCTGGCACTGGTAAGTTTGATGAGGTGGGAGCTGGAGATGGAGAAGGAACCACATTAAACTTGCCTCTACCAGGAGGATCAGGTGACATTACGATGAGAACTGTGTTTGATGAAGTCATTGTGCCTTCAGCTCAAAGGTTCAAGCCAGACATTATTCTTGTTTCTGCTGGGTATGATGCTCATGTGTTGGATCCACTAGCCAATTTACAGTACACAACAGGAACATATTACATGCTTGCGTCCAATATAAAACAATTAGCAAAAGAATTATGTGGAGGCCGATGTGTGTTCTTCTTGGAGGGAGGATATAATCTCAAATCTCTTTCATATTCAGTGGCAGATTCATTCCGTGCACTTCTCGGTGATCGGAGTTTGGCGCCTGAGTTTGATGATCCAAACATTCTGTATGAAGAGCCATCAACAAGGGTCAAGATAGCAATCGATAGGATAAAGGCCATACATTCCCTGTGA 1338 0.4327 MQLHTVPRSPCSSGSVLFLVGHQLSKWKTYNRCNLDTRFFGRRFFHKNQKDNKRCISKCYGAPMFCSASIRSDSFIPSKEQLSNARLIYSVAPAMGHNQESHPESHLRVPAIVNALEEMKLTSKFRGPEITELQNFEPASVDDVASVHARAYVSGLEMAMDQASEKGLIFIDGSGPTYATATTFQESLVAAGAGLALVDSVVAASKNSQDPPTGFALIRPPGHHAVPQGPMGFCVFGNVAIAARYAQRVHGLKRVFIIDFDVHHGNGTNDAFYDDPYIFFLSTHQDGSYPGTGKFDEVGAGDGEGTTLNLPLPGGSGDITMRTVFDEVIVPSAQRFKPDIILVSAGYDAHVLDPLANLQYTTGTYYMLASNIKQLAKELCGGRCVFFLEGGYNLKSLSYSVADSFRALLGDRSLAPEFDDPNILYEEPSTRVKIAIDRIKAIHSL 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2148 445 PRINTS Histone deacetylase superfamily signature 254 269 IPR000286 -
Alju06g2148 445 PRINTS Histone deacetylase superfamily signature 338 348 IPR000286 -
Alju06g2148 445 PRINTS Histone deacetylase superfamily signature 220 243 IPR000286 -
Alju06g2148 445 PANTHER HISTONE DEACETYLASE 2-RELATED 78 411 - -
Alju06g2148 445 SUPERFAMILY Arginase/deacetylase 98 412 IPR023696 -
Alju06g2148 445 Pfam Histone deacetylase domain 102 407 IPR023801 -
Alju06g2148 445 CDD HDAC_classII 102 409 - -
Alju06g2148 445 Gene3D Histone deacetylase domain 72 442 IPR037138 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2148 Alju-ChrAlju06 47500450 47509280 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g2148 06 47500450 47509280 Alju06g2148 06 47500450 47509280 ECH