Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2119 ATGCCCTCTACCCAATATATTATACAAGACCAGCATTTCTTGCAGAAAGCTGTTTCCCGCCAACTGAGAGAAGCGAGCGAAGATCCCTTTCGGCTTGTGCTGTGTGTGCTTCTTCGTCTTCCCGAAGTTGAAGTCCTCTCAAGAAACCGAGGAATGAGGGGTGGAACTTTACAAATAAACTGGCATGAAACCAAACCAGTCCTTTCCCTTGATTTCCACCCACTCACCGCCACTCTCGCCACCGGCGGCGCCGATTTCGACATCAAGCTTTGGTCTGTAAAACCTGCAGAGGCACAAAAGAAACTACCTGTAGTGTCTTATCTGAATAGCTTATCTTACCATAGTTCTGCAGTAAATGTAATTCGATTCTCCTCTTCAGGGGAACTCTTGGCCTCTGGTGCTGATGGAGGTGACCTTATGATATGGAAGTATCATCTGACAGATACAGATCAGACATGGAAGGTCCTCAAGATGTTAAGGTCTCATCACAAGGACATTCTAGACCTTCAATGGTCTCCTGATGGCACATTTTTAATTTCTGGGTCAGTTGATAATAGTTGCATTATATGGGACATTAACAAAGGCACCAATCTTCAGACGTTGGATGCTCATGCCCATTACGTTCAAGGAGTTGCATGGGATCCTCTAGGGAAATATGTTGCTTCTCTTAGTTCGGACAGAACTTGCCGAATTTACATTAATAAACCTAAAAAATCTAAAGGAAGTGGGAAAATCAATTATGTCTGCCAGCAAGTTATTTCGAAGGCAGTACATCCATTCCTAGATAATTCTAAGACAACAAATTTTCATCTTTTCCATGATGAGACACTGCCATCTTTTTTCAGAAGACCAGCCTGGTCTCCTGATGGCTCGTTTCTTGTTGTTCCTGCAGGCTCATACAAAATTACTTCTGGATCTGAATCTGTAAATGCAGCTTACATATTTTCTAGAGAGGATCTCTCTCGACCTGCCATACAGCTTCCTTGTGCAAACAAAGCTGTGGTTGCTGTCCGATTCTGCCCTGTTAATTTCAGCCTTCGTGGGACAAATTCAGCTGGGCTATTTAAGCTTCCCTATCGCCTCATTTTTGCGGTGGCCACTTTGAATTCGTTGTACATTTATGACACTGAGAGCAATCCTCCCATAGCTATTATGGCTGGTCTCCACTATGCAGCAATAACAGACATTGCATGGTCGCCTGATGCTCATTATTTGGCATTGTCCTCTCAAGATGGTTTCTGCACTTTGGTGGAATTTGAAAATAATGAATTAGGAACTCCTATCTCTTCATCAGGAGAAAAGAAGGTTTCTGACAAGGATAAGACACAGCCAAAGACATCTGACAACTTGGTCATTGAAGGTACTGGGAATATTAGTGCAGCTGAAAAAGAAAGTTTGAAAAATGAAGCTAGAGTAAAGGCTGATGACATGATCATTGAATCAACTAGCAATGTTGGTGTAATTAATGAAGGAATCAGGAAAGCTGAAGCAGAAGAACAAGGGGACGACATAGTCATAGAAGTAACTGGAAATGTTGGGGCAGGTGCTGCAGAACGCATGAAAAGGGAAGCAGAAGAGAAGGCTGACTACATGGTCATCGAGGAGACCAGCAATGTTAGTGGAGTTGAGGCAACTGGCAGGAAAAATGAGGCACAAGAGAAGGCTGATGACATGATCATTTGGGAAACGAGCAATGTTGGTGGAGTTGTGGCAGCAAGCCAGGAAAGCTCTGCAAAAGAGAAAGCTGTTGTGATCATCGAAGAAAGTGGGAATGTTGGTGCAGTTGTAGTGGATAGCAGTAAGAATGAAGCAGAGAAACAGCCAGTAAGTTCAGATAGTGTGAAATCAGATGAGCAAGACAAGACTGAAAAACACCCATCTTGTTTGGATGCTGTAAGAAAAGAAGCTGAAGAGAGGACAGAGAAACAAACATCTAGTTTAAATAAAAGGGAAGCAGAAGAAAGGGTAGCATCTAGTTCAAGGGGAACGGCAACATCAAATAAGACAGGCAAAAAGCGTATTACTCCCATTGCCATTGATCCATGA 2046 0.4296 MPSTQYIIQDQHFLQKAVSRQLREASEDPFRLVLCVLLRLPEVEVLSRNRGMRGGTLQINWHETKPVLSLDFHPLTATLATGGADFDIKLWSVKPAEAQKKLPVVSYLNSLSYHSSAVNVIRFSSSGELLASGADGGDLMIWKYHLTDTDQTWKVLKMLRSHHKDILDLQWSPDGTFLISGSVDNSCIIWDINKGTNLQTLDAHAHYVQGVAWDPLGKYVASLSSDRTCRIYINKPKKSKGSGKINYVCQQVISKAVHPFLDNSKTTNFHLFHDETLPSFFRRPAWSPDGSFLVVPAGSYKITSGSESVNAAYIFSREDLSRPAIQLPCANKAVVAVRFCPVNFSLRGTNSAGLFKLPYRLIFAVATLNSLYIYDTESNPPIAIMAGLHYAAITDIAWSPDAHYLALSSQDGFCTLVEFENNELGTPISSSGEKKVSDKDKTQPKTSDNLVIEGTGNISAAEKESLKNEARVKADDMIIESTSNVGVINEGIRKAEAEEQGDDIVIEVTGNVGAGAAERMKREAEEKADYMVIEETSNVSGVEATGRKNEAQEKADDMIIWETSNVGGVVAASQESSAKEKAVVIIEESGNVGAVVVDSSKNEAEKQPVSSDSVKSDEQDKTEKHPSCLDAVRKEAEERTEKQTSSLNKREAEERVASSSRGTATSNKTGKKRITPIAIDP 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2119 681 ProSitePatterns Trp-Asp (WD) repeats signature. 178 192 IPR019775 -
Alju06g2119 681 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 111 143 - -
Alju06g2119 681 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 159 195 - -
Alju06g2119 681 Coils Coil 633 653 - -
Alju06g2119 681 ProSiteProfiles Trp-Asp (WD) repeats profile. 159 200 IPR001680 GO:0005515
Alju06g2119 681 Pfam WD domain, G-beta repeat 195 232 IPR001680 GO:0005515
Alju06g2119 681 Pfam WD domain, G-beta repeat 154 191 IPR001680 GO:0005515
Alju06g2119 681 Pfam WD domain, G-beta repeat 109 143 IPR001680 GO:0005515
Alju06g2119 681 Pfam WD domain, G-beta repeat 62 92 IPR001680 GO:0005515
Alju06g2119 681 FunFam Chromatin assembly factor 1 subunit FAS2 55 301 - -
Alju06g2119 681 MobiDBLite consensus disorder prediction 597 681 - -
Alju06g2119 681 MobiDBLite consensus disorder prediction 608 657 - -
Alju06g2119 681 SMART WD40_4 152 191 IPR001680 GO:0005515
Alju06g2119 681 SMART WD40_4 378 418 IPR001680 GO:0005515
Alju06g2119 681 SMART WD40_4 320 375 IPR001680 GO:0005515
Alju06g2119 681 SMART WD40_4 194 233 IPR001680 GO:0005515
Alju06g2119 681 SMART WD40_4 104 143 IPR001680 GO:0005515
Alju06g2119 681 SMART WD40_4 54 92 IPR001680 GO:0005515
Alju06g2119 681 CDD WD40 64 412 - -
Alju06g2119 681 Gene3D - 41 250 IPR015943 GO:0005515
Alju06g2119 681 PANTHER CHROMATIN ASSEMBLY FACTOR 1 SUBUNIT B 52 681 IPR045145 GO:0006335
Alju06g2119 681 MobiDBLite consensus disorder prediction 658 672 - -
Alju06g2119 681 ProSiteProfiles Trp-Asp (WD) repeats profile. 201 232 IPR001680 GO:0005515
Alju06g2119 681 ProSiteProfiles Trp-Asp (WD) repeats profile. 111 152 IPR001680 GO:0005515
Alju06g2119 681 ProSiteProfiles Trp-Asp (WD) repeats profile. 67 101 IPR001680 GO:0005515
Alju06g2119 681 SUPERFAMILY WD40 repeat-like 59 416 IPR036322 GO:0005515
Alju06g2119 681 Gene3D - 251 475 IPR015943 GO:0005515
Alju06g2119 681 PRINTS Beta G protein (transducin) signature 178 192 IPR001632 -
Alju06g2119 681 PRINTS Beta G protein (transducin) signature 159 175 IPR001632 -
Alju06g2119 681 PRINTS Beta G protein (transducin) signature 215 232 IPR001632 -
Alju06g2119 681 MobiDBLite consensus disorder prediction 427 454 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2119 79 232 Miscellaneous Gene Families AT5G08390 29.221 1.57e-15 78.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g2119 06 47230542 47235901 Alju06g2119 06 47230542 47235901 ECH