Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2100 ATGGCGGGACATGACACCGAACTGAAGGCGGCGACGACAGCATACCGGAATGCGAAGGCCGAGGCGAACAGGCAGGAGGAGGCACGATGGGCGAACGTGATCGGAAACATATTGAAGAATAGAGGAGAGTACGTCGAAGCCCTCAGGTGGCTTCGAAGAGACTATGAGGTTTCTCTCAAATACTTGCCCGAGAAGCATTTGCTTCCCACCTGTCAATCTCTTGGGGAAATTTATCTTCGGCTTGAGCGTTTCAGCGAGGCTCTAACGTATCAGAAAAAACACTTGGAGCTCGCTAGGGATGCTAATGACCTCGTTGAGCAGCAAAGGGCAAGCACACAACTCGGTCGTACTTATCATGAATTATTTTCAAGATCAGAACATGATCATCTTTCAATACGAAATGCCAAAAAGTATTTTAAGTCTTCTATGGAGCTAGCACAGATTCTTAAGGAGGACCCACCAACTAATAAGTCTTCCTTTGTCAAAGAATATATTGATGCACACAACAATATTGGAATGCTGGAAATGGAACTTGATAACTTGGAAGAGGCTAAGAAAATCCTAACTAGAGGACTAGAGATTTGCAATGAAGAGGAGGTCAGTGAAGATGATGATGGGCGCAGCAGGCTCCATCATAACCTTGGAAATGTATACATGGAACTGAGAATGTGGGAAAAAGCTAGAAAACATATTGAGAAGGACATCCAAATTTGTAACAGAATTGGACATTGTCAAGGAGAAGCAAAGGGCTACATTAATCTTGGTGAAGTGCATTACAGGACTCAGAAGTATGATGAAGCACGTTCTTATTATGAGAGGGCACTTACTCTAGCGAAATCCTTGGAAGACGAGGATGCATTGGTTAGGCAAATTGATGAAAATATCAAAACTGTAAACAAAGCTGTCAAAGTAATGGATGAATTAAAGAAAGAAGAGCAGAACTTCAAAAAGCTTAAAAGATATTTGGCTGCTGCAAGAGGCTCAGCACATGAGCGTAAATACCTTCTGCAGCAAAATGCTTCTGTTGATTGCCTTCTTGAGAAATCAAGTATGATCCTTGCATGGGAGAAGCATTGTGAATTTGCAAAGGAGAAGAAAGAAATAGCAAGTGAATTGCGTGACAATGAAAAGCTCAGTGATTCATATCTGGCTCTTGGAGAATCATACCAGAAGCTCAGAAATTTCAATGAATCTATTAAATGGTACAGAAAGAGTTGGGAATTGTACAAAACAATTGGTAACTTAGAGGGCCAAGCACTTGTGAAAATTGATATTGGCAATGTTTTGGATTCTGTTCACAATTGCAAAGGAGCACTAGATACATTTGAAGAGAGCTACAGGATTGCTGTTGAAGCTAACCTTCCTTCTGTACAGCTTTCTGCCCTGGAAAATATGCACTATAGCAACATGATAAGATTTGATAATGAGAATGAAACCAGGAGGTTGAAACTTCTAATTGATCAGCTGAAGAAATCAATAGATAAAGACCCTGAACCAAAAGATATACAAGAGGATTGCTGCTCTGAGACTGATACTGAAGCAGAAGGTAATCTCTCAAATAGTGGGTCTGAATCAAAAATGACTACTGCTCGAGAAGATTGGAACGATGACATGCCCCTGATGTCAGTCTTTCAGTCCACAAAAAAATCATCCCAAAAAGCAGGTTTCATGGAAGGTTTTGGCAACTCTGTAGAGGAACCTCAGCAGTCACCTAGAAGTTTGCCAAAAACTACCAGTCAGAAGGCTGTTGGTTTTAAACGTGTCCGTGTAATCCTTTCTGATGATGAGGAGGAGGAAGAGAATGTTGATGAGATGGAGCATTCAAAGAGAAAGCCACGTGATTGTCAGCTAGAGGACTTCTCTACTTCTGATACGATAAAGAGTAAAAGAAGTGGTGCCGGTCCTGCTGCTAAAATTCAGGCTGTCTCAAAGTATGGATCCAAATGTCCATTTAAGGTTGAAGAAAACAGTAGTTCCTTACAATGCCGGAATCCTCACAGTGCCACAAAAACTGCCAGTAATTCTAGATCTCTGAGCAATGATATAGTTACCGAACCTGATATTGCTAGTTGTTCAAAATGTGATACGAATGCCTCTGGCAAACTATTGCACCATGCTATCACCTATCCCATGAGGCGTAGTTCTGAACGAGATCAAAATATTACAGTCAAGATTGAAAATGACCTGATTTACATGGAAGCAACCTCGTTTGTTGCTAGTGATCAGTTGAAGTCTGAAGTTGCATGCTTATATTATCTACAGCTTCCTAGAGAGAAAAGATCTGAGGGTTTGTTGCCCATTATTCAGCACATAAAATGTGCTGGAAGAGATCTAGAATCCCTAGAAACTGTCGAAAATCTTAAGCAATATCTGGGAGATGACATGGTCGAAGTTTCTGTTGATGGATGGGTTCAGAAGCGCTTAATAAAAATGTACATGGACTTCTGCGAGGAGTTGTCCGAGGTACCAAATCTCAAGGTACTCAAGAAACTATACAATTTAGAGGTTTCAGATGATGAGATTATTGTGACTGAGTGCGACCTGCAAGATTTATCTGTAACTCCTTTGTTAAATGCACTGCTTTCTCACAAAAGATTTGCAATGCTTGATCTCTCTCACAATATGTTAGGAAATGGAACGATGGAGAAACTTCAGAAAGTGTTCATGGAATCAGGCCAATCTTATGGCGGCCTGACTTTGGACTTGCATTGCAATCGGTTCGGCCCAACTGCTTTGTTTCAGATATGTGAATGCTCAGTCCTTTTTGCTCGACTTGAAGTGCTTAACTTTTCTGGAAACCGTCTTACTGATGCATGTGGATCTTATCTTTCAACTATCTTGGAAAAATGTACTGCCCTCTGTAGCTTGAATGTAGAGCGCTGTCATATCACATCTAGAACCATTCAAAAGATGGCCGATGCATTGGACTCTAAATCTGTACTTTCACAGCTTTGTATAGGTTATAACAACCCTGTATCTGGAAATGCTATTGTTAATCTACTGGCCAAGCTTTCTACTTTAAAAAGATTTTCTGAGCTGAATCTGAGCGGCCTAAAATTAGGCAAACCGGTTGTTGATACACTTTGCCAGCTTGCAGGGACCATTACTTTATCAGGCTTAATACTTGGAAGCACGGGAATTGGAAATGAAGGGGCAATGCAATTAGCTCGATCATTGTTCAATGGGACACAAGAACTTGTGAAACTTGACCTATCTTATTGCGGGCTTACATCTAATAACTTTTTGAATGCAGTTGTTTCTTCATTTTGCTCCATTCTTGAGCTTAAACTGGAAGGAAATCCTATTATGCCAGAGGGCAGCAATACTCTCTCTTCTCTGCTAATAGACCCACAGTGCTGCCTAAAAGTTTTAGTCCTTAGAAACTGTCAGCTTGGGCTTACTGGAATTCTCCACATACTTGAGGCACTAGCAGAGAACAACTGCCTACAGGAGCTTAATCTAGCAGTTAATGCTGCTCCGAATGAACTTTCTTCTCTACAACATGACTTTTCAGTAAAAGGGTGCTCAGAAAACTTGGAGCAGAAGCTAGATACTAGTGAATTAAGTTCTCCCATGGAACTGGAAAATACTAAAGGGGTTCTTGGCTCTTCCAATAATGGCAATTGTGAGCTTGAACTTGCTAACAATCAAGATGATCAGACGAGAGTAGAAGCTGCAGCTTCTGGAATTGATGACAGTTGTGTTAGTTCATGTCAAAGAAATAATTCTTCATCTCCCAAATGCAATCATTTAATTAAACTTTCAACTGCTATTGGTCTGGCAAACAACCTGCAATTACTTGACCTTAGCGAAAATGGTTTCTCTGCAGAAGCTGCAGAACTGTTGTATGGTTCATGGTCATCTTCGCGAACTGGTTCAAGTCACAAGCACATTACTGATCAGATTATTCATTTCTCAACCAAAGAAAATAAGTGCTGCAGAGTGAAGCCGTGCTGCAAGAAAGATTGA 3969 0.4082 MAGHDTELKAATTAYRNAKAEANRQEEARWANVIGNILKNRGEYVEALRWLRRDYEVSLKYLPEKHLLPTCQSLGEIYLRLERFSEALTYQKKHLELARDANDLVEQQRASTQLGRTYHELFSRSEHDHLSIRNAKKYFKSSMELAQILKEDPPTNKSSFVKEYIDAHNNIGMLEMELDNLEEAKKILTRGLEICNEEEVSEDDDGRSRLHHNLGNVYMELRMWEKARKHIEKDIQICNRIGHCQGEAKGYINLGEVHYRTQKYDEARSYYERALTLAKSLEDEDALVRQIDENIKTVNKAVKVMDELKKEEQNFKKLKRYLAAARGSAHERKYLLQQNASVDCLLEKSSMILAWEKHCEFAKEKKEIASELRDNEKLSDSYLALGESYQKLRNFNESIKWYRKSWELYKTIGNLEGQALVKIDIGNVLDSVHNCKGALDTFEESYRIAVEANLPSVQLSALENMHYSNMIRFDNENETRRLKLLIDQLKKSIDKDPEPKDIQEDCCSETDTEAEGNLSNSGSESKMTTAREDWNDDMPLMSVFQSTKKSSQKAGFMEGFGNSVEEPQQSPRSLPKTTSQKAVGFKRVRVILSDDEEEEENVDEMEHSKRKPRDCQLEDFSTSDTIKSKRSGAGPAAKIQAVSKYGSKCPFKVEENSSSLQCRNPHSATKTASNSRSLSNDIVTEPDIASCSKCDTNASGKLLHHAITYPMRRSSERDQNITVKIENDLIYMEATSFVASDQLKSEVACLYYLQLPREKRSEGLLPIIQHIKCAGRDLESLETVENLKQYLGDDMVEVSVDGWVQKRLIKMYMDFCEELSEVPNLKVLKKLYNLEVSDDEIIVTECDLQDLSVTPLLNALLSHKRFAMLDLSHNMLGNGTMEKLQKVFMESGQSYGGLTLDLHCNRFGPTALFQICECSVLFARLEVLNFSGNRLTDACGSYLSTILEKCTALCSLNVERCHITSRTIQKMADALDSKSVLSQLCIGYNNPVSGNAIVNLLAKLSTLKRFSELNLSGLKLGKPVVDTLCQLAGTITLSGLILGSTGIGNEGAMQLARSLFNGTQELVKLDLSYCGLTSNNFLNAVVSSFCSILELKLEGNPIMPEGSNTLSSLLIDPQCCLKVLVLRNCQLGLTGILHILEALAENNCLQELNLAVNAAPNELSSLQHDFSVKGCSENLEQKLDTSELSSPMELENTKGVLGSSNNGNCELELANNQDDQTRVEAAASGIDDSCVSSCQRNNSSSPKCNHLIKLSTAIGLANNLQLLDLSENGFSAEAAELLYGSWSSSRTGSSHKHITDQIIHFSTKENKCCRVKPCCKKD 1322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2100 1322 SUPERFAMILY TPR-like 157 285 IPR011990 GO:0005515
Alju06g2100 1322 ProSiteProfiles TPR repeat profile. 379 412 IPR019734 GO:0005515
Alju06g2100 1322 ProSiteProfiles TPR repeat region circular profile. 248 277 - -
Alju06g2100 1322 MobiDBLite consensus disorder prediction 495 528 - -
Alju06g2100 1322 MobiDBLite consensus disorder prediction 512 528 - -
Alju06g2100 1322 SUPERFAMILY TPR-like 362 464 IPR011990 GO:0005515
Alju06g2100 1322 Gene3D Tetratricopeptide repeat domain 346 497 IPR011990 GO:0005515
Alju06g2100 1322 FunFam Protein TONSOKU 3 157 - -
Alju06g2100 1322 ProSiteProfiles TPR repeat profile. 248 281 IPR019734 GO:0005515
Alju06g2100 1322 MobiDBLite consensus disorder prediction 594 634 - -
Alju06g2100 1322 PANTHER PROTEIN TONSOKU 1 1322 IPR044227 GO:0005634|GO:0006325|GO:0009933|GO:0040029|GO:0072423
Alju06g2100 1322 Coils Coil 8 28 - -
Alju06g2100 1322 Gene3D Ribonuclease Inhibitor 815 1187 IPR032675 -
Alju06g2100 1322 SMART tpr_5 248 281 IPR019734 GO:0005515
Alju06g2100 1322 SMART tpr_5 165 198 IPR019734 GO:0005515
Alju06g2100 1322 SMART tpr_5 379 412 IPR019734 GO:0005515
Alju06g2100 1322 SMART tpr_5 68 101 IPR019734 GO:0005515
Alju06g2100 1322 SMART tpr_5 419 452 IPR019734 GO:0005515
Alju06g2100 1322 SMART tpr_5 28 61 IPR019734 GO:0005515
Alju06g2100 1322 SMART tpr_5 208 241 IPR019734 GO:0005515
Alju06g2100 1322 SMART LRR_RI_2 922 949 - -
Alju06g2100 1322 SMART LRR_RI_2 1034 1061 - -
Alju06g2100 1322 SMART LRR_RI_2 863 890 - -
Alju06g2100 1322 SMART LRR_RI_2 1261 1288 - -
Alju06g2100 1322 SMART LRR_RI_2 1118 1145 - -
Alju06g2100 1322 SMART LRR_RI_2 1089 1116 - -
Alju06g2100 1322 SUPERFAMILY TPR-like 20 152 IPR011990 GO:0005515
Alju06g2100 1322 MobiDBLite consensus disorder prediction 603 625 - -
Alju06g2100 1322 Pfam Tetratricopeptide repeat 166 195 IPR019734 GO:0005515
Alju06g2100 1322 Pfam Tetratricopeptide repeat 380 408 IPR019734 GO:0005515
Alju06g2100 1322 Pfam Tetratricopeptide repeat 28 99 - -
Alju06g2100 1322 Pfam Tetratricopeptide repeat 208 280 - -
Alju06g2100 1322 FunFam Protein TONSOKU 815 1187 - -
Alju06g2100 1322 SUPERFAMILY RNI-like 830 1288 - -
Alju06g2100 1322 Gene3D Tetratricopeptide repeat domain 4 326 IPR011990 GO:0005515
Alju06g2100 1322 MobiDBLite consensus disorder prediction 558 580 - -
Alju06g2100 1322 Coils Coil 164 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2100 Alju-ChrAlju06 46922388 46932670 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g2100 06 46922388 46932670 Alju06g2100 06 46922388 46932670 ECH