Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1976 ATGGCCCCTCAGTGGCTGTTGGTCTGGGTAATGGCGTTCTTTCTTCATGGCAATGCAATGCCGATCACGTTTTCTGCGAGGCTGATTCATCGTTTCTCTGAAGAAATGAAGGCGCTCCAGGTTTCCGGTGGTTGTGGTGGTCGTAATGTGTCTGGTGGCTGGCCGGAGAGGAGGAGTATGGAATACTACGAGATGCTTGTTAGCGGCGACTTTCTCAGGCATAAGGTGAAGCTTCGAGCTCCACATCAGTTGCTTTTCCCCTCTCATGGTAGCAAAACGATGTCCCTTGGAAACGACTTTGGCTGGTTACATTACACATGGATTGATATAGGGACGCCAAGTACTTCATTCCTTGTAGCACTGGATGCTGGTAGTGATCTATTTTGGGTTCCATGTGATTGCATACAGTGTGCTCCTCTATCTGCAAGTTACTATGCCAATCTGGATAGAGATCTGAATGAGTATAGTCCATCTCGATCAACATCCAGCAAGAATCTATCTTGTAGCCATCAGTTATGTGAGATCGGTTCCGACGGTAAAAGTTCCAGGCAGCAGTGTCCTTACACTGTCAGTTACATCGCTGAGAATACATCAAGTTCCGGATTGTTAGTGGAGGACATATTGCATCTTACGTCAAGTGGTGATGGTGAATCTAACTCTACAGTCCAGGCTCCAGTCATTATAGGGTGTGGTATGAAGCAAAGTGGTGGTTATTTGGATGGGGTTGCTCCAGATGGTCTAATGGGTTTGGGAACTGGAGAAATTTCAGTTCCAAGCTTGCTTGCCAAATCAGGATTGATCCATAATTCTTTTTCAATGTGCTTTGACGATGATGATTCTGGTAGAATATTCTTTGGGGACCAGGGATCAGCCATCCAACAGTCTACTCCATTCCTGCCATTGGATGGAACATATTCAACATATGTTATTGGAGTGGAGGCATGTTGTATCAAGGATTCATGTCTTAAGATGACGAGCTTCAAAGCACAGGTTGATAGTGGAACATCATTTACATTTCTTCCAGGCCATGTGTATGATGCAATTACTGAGGAGTTTGACCAACAAGTGAATGCTTCGAGATCTACCTTTGAGGAATCCCCTTGGCACTATTGCTATGCTTCTAGTTCACCTGAGTTGCCCAAGGTTCCCTCCCTCACATTTACATTCCAACATAATAGCAGCTTTGTGGTCCATAACCCTGTATTTGTATTTTATGACAGTCAGGGAGTGCGGGGAGTTATTGGATTTTGTTTAGCCATACAACCAACAGATGGAGACATGGGAACAATTGGACAGAACTTCATGACTGGCTACAGGCTGGTATTTGATAGGGAAAACATGAAGATGTCCTGGTCGCAGTCAAGTTGTGAGGATCTTGCTGGTAAGAGTATGCCCCTGTCTCCAAATAAGACGCCGCCAAAACCCTTGCCGACAAATGAGCAGCAGAGAACCAATGGTCACGCAGTTGCTCCAGCTGTTGCCGGAAGAGCTCCCCACAAACCATCAACTGCTTCATCTCAGATGATGTCATGCCGAGAACAACATTGGCACATTTGCTTGTTTCTTCTTCTTCAACTTGTAGTAGCCTCTTTAAGGCTTTAG 1602 0.4538 MAPQWLLVWVMAFFLHGNAMPITFSARLIHRFSEEMKALQVSGGCGGRNVSGGWPERRSMEYYEMLVSGDFLRHKVKLRAPHQLLFPSHGSKTMSLGNDFGWLHYTWIDIGTPSTSFLVALDAGSDLFWVPCDCIQCAPLSASYYANLDRDLNEYSPSRSTSSKNLSCSHQLCEIGSDGKSSRQQCPYTVSYIAENTSSSGLLVEDILHLTSSGDGESNSTVQAPVIIGCGMKQSGGYLDGVAPDGLMGLGTGEISVPSLLAKSGLIHNSFSMCFDDDDSGRIFFGDQGSAIQQSTPFLPLDGTYSTYVIGVEACCIKDSCLKMTSFKAQVDSGTSFTFLPGHVYDAITEEFDQQVNASRSTFEESPWHYCYASSSPELPKVPSLTFTFQHNSSFVVHNPVFVFYDSQGVRGVIGFCLAIQPTDGDMGTIGQNFMTGYRLVFDRENMKMSWSQSSCEDLAGKSMPLSPNKTPPKPLPTNEQQRTNGHAVAPAVAGRAPHKPSTASSQMMSCREQHWHICLFLLLQLVVASLRL 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1976 533 ProSiteProfiles Peptidase family A1 domain profile. 104 452 IPR033121 -
Alju06g1976 533 MobiDBLite consensus disorder prediction 462 486 - -
Alju06g1976 533 PRINTS Pepsin (A1) aspartic protease family signature 110 130 IPR001461 GO:0004190|GO:0006508
Alju06g1976 533 PRINTS Pepsin (A1) aspartic protease family signature 428 443 IPR001461 GO:0004190|GO:0006508
Alju06g1976 533 PRINTS Pepsin (A1) aspartic protease family signature 329 340 IPR001461 GO:0004190|GO:0006508
Alju06g1976 533 SUPERFAMILY Acid proteases 98 458 IPR021109 -
Alju06g1976 533 FunFam Aspartyl protease family protein 1 290 458 - -
Alju06g1976 533 Gene3D Acid Proteases 79 287 IPR021109 -
Alju06g1976 533 PANTHER ASPARTYL PROTEASES 65 449 IPR001461 GO:0004190|GO:0006508
Alju06g1976 533 FunFam Aspartyl protease family protein 1 90 287 - -
Alju06g1976 533 Pfam Xylanase inhibitor N-terminal 105 287 IPR032861 -
Alju06g1976 533 Gene3D Acid Proteases 289 458 IPR021109 -
Alju06g1976 533 Pfam Xylanase inhibitor C-terminal 326 452 IPR032799 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1976 Alju-ChrAlju06 44940157 44945052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1976 80 459 Miscellaneous Gene Families AT1G44130 26.434 2.17e-23 100
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g1976 06 44940157 44945052 Alju06g1976 06 44940157 44945052 ECH