Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1890 ATGAAGTGTGTCTCCGTGATCTCAATCTGTTTCCTCCTTTTGGGTATGCAGAGTGTGACGTCTAAAAATATATCTGAGAACGAGAGAGGCCTATGGCAAGCAAGAGTCCCACCAAGAGGTTGGAATTCCTATGATTCCTTTTGCTGGACAATTTCAGAAGAAGAATTCTTACAGAGTGCAGAAGTCATCTCCAAGCGTCTCCATGCTCATGGATACGAGTATGTTGTGGTGGATTACCTTTGGTATAGAAGGAAAGTTGAGGGTGCTTATACCGATTCTCTTGGATTTGATGTGATTGATGAATGGGGAAGGATGATCCCTGATCCACAAAGATGGCCTTCTTCTAAAGGTGGGAAAGGGTTCAAAGAAGTGGCAGATAAAGTACATAGCATGGGTTTGAAATTTGGGATTCATGTTATGAGAGGGATAAGTACTCAAGCAGTCAATGCAAACACCCCTATCATTGATCCAAGGAAGGGAGTCGCATATACAGAATCCGGTAAAGTGTGGCGTGCAAAAGACATAGCAATCCCAGAAAGGGCTTGTGCATGGATGCCTCATGGTTTCATGAGTATAAATACGAAGCTCGGGGCTGGAAGAGCCTTTTTGAGGTCCCTCTATGAGCAGTATGCTTCATGGGGTGTTGATTATGTGAAACACGACTGTGTGTTTGGCGACGACTTAGATCTGAATGAAATAAGTTATGTTTCAAAGATTCTCAGGGCACTTGATCGCCCCATTGTATATTCTCTGTCCCCTGGAACCAGTGTGACACCAGCAATGGCCAAGGACGTCAGTGGACTAGTTAACTTATATCGCATAACAGGAGATGACTGGGATACATGGGGTGATGTCGCGGCTCATTTTGATGTGACTAGGGATTTTTCTAATGCTAATATGATAGGAGCAAGGGGCTTGAAGGGATACTCATGGCCTGATTTAGATATGCTACCATTGGGATGGCTAACTGATCCAGGTTCAAATGAAGGTCCACACAGGTACGGTCGCCTTAATCTAGAAGAGCAAAAAACTCAGATGACTTTGTGGGCTATGGCAAAGTCTCCTCTCATGTATGGAGGGGATGTGCGGAAGCTTGATCCAACGACATATGATCTCATCACAAATCCTACTGTTCTGGAGATTAATGCTTTTAGCTCAAATAATATGGAGTTTCCACATATCACAAGCTTGATGAATGTGAAGATTCAAGGACAGGATCTTACAGAGCAAATGAGAGGATCTAAGAGAAGTGGGCAAACATCAAATACACATTTAATTGGTCTCACTGGCTGTACTGAGTCAAATGCAGTTGGTTGGTCAATTGAAAGCCTTAAAGAGGATGTTGAAAGGATCTGTTGGACAAGGAGCTCAGGAAGCAAGCATCAGGCACCTTTCTGTGTGCACAAGAGAGAAATTCGTGTGGCATTAGAAAAGAGTACGAATCAAGAAGACTATAGAAGAAAACATCATTTAGTTGCAGCCTACACAAAGCAACTTTGTCTTGAAGCTTCTCCAAAAAGAAAGCTTAGTTCTAAAGAATTCCAGAGAGGCTCATTTTCTACTTGCAGATGGGATGCAAATCAGATGTGGGAATTGAACCCTAATGGGACCCTGGTAAATAGTTATTCCAGCCTGTGTGCGACAGTAGATTCTGCCAAAGCTAAAACTCATTCTCTTCACGGGATTCGCTCTTGGATTGCAAAAGGAAGACGAGGAGAAGTCTATGTTGCTTTCTTCAACCTGAATGAACAGAAGACAGTGATATCTGCAAAGGGATCAGACTTGGCCAAGGTAATACCTGTCACCTATAATGCCTGTAAGTGCAGGGAAGTGTGGAGTGGGAAGGCCATCGACACAAGACATGGGACACTGTCTGCGGAAGTGGGAAGGCATGGCTGTGCACTACTTGTCCTTACTTGCCACTAA 1926 0.4372 MKCVSVISICFLLLGMQSVTSKNISENERGLWQARVPPRGWNSYDSFCWTISEEEFLQSAEVISKRLHAHGYEYVVVDYLWYRRKVEGAYTDSLGFDVIDEWGRMIPDPQRWPSSKGGKGFKEVADKVHSMGLKFGIHVMRGISTQAVNANTPIIDPRKGVAYTESGKVWRAKDIAIPERACAWMPHGFMSINTKLGAGRAFLRSLYEQYASWGVDYVKHDCVFGDDLDLNEISYVSKILRALDRPIVYSLSPGTSVTPAMAKDVSGLVNLYRITGDDWDTWGDVAAHFDVTRDFSNANMIGARGLKGYSWPDLDMLPLGWLTDPGSNEGPHRYGRLNLEEQKTQMTLWAMAKSPLMYGGDVRKLDPTTYDLITNPTVLEINAFSSNNMEFPHITSLMNVKIQGQDLTEQMRGSKRSGQTSNTHLIGLTGCTESNAVGWSIESLKEDVERICWTRSSGSKHQAPFCVHKREIRVALEKSTNQEDYRRKHHLVAAYTKQLCLEASPKRKLSSKEFQRGSFSTCRWDANQMWELNPNGTLVNSYSSLCATVDSAKAKTHSLHGIRSWIAKGRRGEVYVAFFNLNEQKTVISAKGSDLAKVIPVTYNACKCREVWSGKAIDTRHGTLSAEVGRHGCALLVLTCH 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1890 641 PRINTS Glycosyl hydrolase family 27 signature 125 146 IPR002241 GO:0004553|GO:0005975
Alju06g1890 641 PRINTS Glycosyl hydrolase family 27 signature 340 361 IPR002241 GO:0004553|GO:0005975
Alju06g1890 641 PRINTS Glycosyl hydrolase family 27 signature 31 50 IPR002241 GO:0004553|GO:0005975
Alju06g1890 641 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 4 640 IPR002241 GO:0004553|GO:0005975
Alju06g1890 641 Pfam Alpha galactosidase C-terminal beta sandwich domain 562 638 IPR041233 -
Alju06g1890 641 SUPERFAMILY (Trans)glycosidases 32 382 IPR017853 -
Alju06g1890 641 Pfam Alpha galactosidase A 208 382 IPR002241 GO:0004553|GO:0005975
Alju06g1890 641 Pfam Alpha galactosidase A 50 145 IPR002241 GO:0004553|GO:0005975
Alju06g1890 641 SUPERFAMILY Glycosyl hydrolase domain 560 639 - -
Alju06g1890 641 Gene3D - 555 640 IPR013780 -
Alju06g1890 641 CDD GH27 37 382 IPR002241 GO:0004553|GO:0005975
Alju06g1890 641 SUPERFAMILY Ricin B-like lectins 492 554 IPR035992 -
Alju06g1890 641 Gene3D Aldolase class I 29 385 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1890 Alju-ChrAlju06 42620829 42627073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1890 2 475 Glycoside Hydrolase AT3G26380 64.979 0.0 648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g1890 06 42620829 42627073 Alju06g1890 06 42620829 42627073 CCT
Alju06g1890 06 42620829 42627073 Alju06g1890 06 42620829 42627073 ECH