Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1875 ATGAATCCTCTTTGCTGCATTGCTCCCGTTTCGATCGATCGGGACCGGGCCAACCCTGTTGTGCCCAAATCACCTGCTCAGTGTCAGTTAGGCGTGGATGCGTCTGTGAAAACTGTTAACTATGGTTCGAAACCCAGCTTTTCTACTGTTGATTCGTCGCTTGGTTCTGATTCCAACAAAGCGTCTTTCACTTCGAATCACGATGAGGAGGAGGTGGTGGTGGTCAATGAAGCTAGAGATTCCAAGGTGTTCAGTGGCACTGTAGCTGGGATTTTGTACAAGTGGGTGAATTATGGTAAGGGTTGGAGGTCCAGGTGGTTCATGCTTGAAGATGGGGTGCTTTCTTATTACAAGATTCATGGTCCTGATAAGATTTGGATGAGTCCGGCTAGAGATAGGAGTATCAGGGTGATCGGTGAGGAGTCATCTAAATACATGAAGAAAGCAAATTGGAATCTAAATCGGCAAGGGGGCGCCACCAAGCAATGTAAACCCTTCGGTGAGATACATTTGAAGGTTTCTTCAGTTCGTGGCAGCAAGTCTGATGACAAGCGACTTTCCATATTTACTGGCACAAAAACTCTGCACTTGCGTTGTATATCTAGAGAAGACAGATCTATGTGGATTGAAGCTCTGCAGTCTGCGAAAGATCTTTTCCCTAGATCTCTAACAAGCAGTGATCTTGCTACCTCAGAAGATATTGTGGTTTCAACAGAAAAATTGCGATCTCGATTATCACAAGAAGGCATATCTGAAGCAGTTATTAAAGACTGTGAATCAATTATGCTTTCAGAAGTCTCTTACCTTCAAGACCGCCTGAAATTTCTTCGTCAAAAACACGTGATGTTGCTGGACACCTTAAAACAGCTAGAGACTGAGAAAATAGAGTTGGAAACTACTGTGGTGGATGAAACTAAGGAACGTGAGTCATATTGTGGGCAAGGGAATAGAAGATTTAGTGATTTCTATTCCGTCATGTCAGAAGGCAGTGCTTCTGATTCTGTAGCAGATAATGAAAGCCAAGATGGAGGGGATGTTGAAACAGATGATGATGATGGAACATATTTTGACACAAATGAGTTTCTGTCTTCAGATGCTTTGAGAAGTGCATCCTACCGAAGTAGGGAAGGTGTGGGAAATTCTTGTATATATGACAGAGATTCTTTCTCTTCTGATGGCTTGCACGGGCTTGAGAAGGGAATTAAAGATGTAAAATATCCATGTGTCAAAAGACGGGATTATTTACCAGAACCAAAAGAGAAAGATAAGCCTGTTGGGTTGTGGTCAATTATTAAAGACAATATTGGGAAAGATCTTTCTGGAGTTTGTCTTCCTGTTTATTTTAATGAGCCTCTCTCTTCATTGCAAAAGTGCTTTGAAGACTTGGAGTATTCATACTTGGTTGATAGAGCGTTGGAGTGGGGAAAGCAGGGGAATGATTTGATGAGAATTCTAAATATTGCGGCTTTTGCTGTGTCTGGCTATGCTTCAACAGAAGGTCGACAGTGTAAACCATTTAATCCTCTACTTGGGGAGACTTATGAAGCTGACTATCCAGATAAAGGACTTAGGTTTTTCTCAGAAAAGGTTAGTCATCATCCTATGGTTGTTGCTTGTCACTGTGAAGGAAGAGGATGGAAATTCTGGGCAGATTCCAATTTGAAAGGCAAGTTCTGGGGACGTTCTATTCAGCTAGATCCTGTGGGTGTCCTCACCCTTCAGTTTGAAGATGGTGAAACATTTCAATGGAGCAAGGTCACCACTTCAATATACAATATCATACTAGGAAAAATTTATTGTGATCACTATGGGACCATGCGCATCAAAGGCAGTGGCAACTACTCCTGCAAGCTCAAGTTCAAAGAGCAGTCTATAATTGACCGAAATCCGCATCAGGTCCATGGATTTGTTCAGGACAATAGAACTGGAGAGAAGGTAGCGATGTTAATTGGGAAGTGGGACGGGTCAATGTACTATGTCCTCGGGGATCCAACCACAAAGCCTAAAGGATATGATCCAATGACAGAAGCTGTATTAATATGGGAAAGGGACCCCTACGTTACTAAGACAAGATACAACCTCTCTCCTTTTGCAATATCATTGAATGAAATAACACCTGGTTTATTGGAGAAGTTGCCTCCAACTGATTCAAGGCTGAGACCAGATCAAAGGCATCTAGAAAATGGAGAATACGAGTTGGCAAATGCAGACAAACTAAGACTTGAACAATTGCAGAGACAGGCAAGAAGCATGCAGGAAAGAGGGTGGCAGCCAAGGTGGTTCCGGAAAGATGAGGATGGTTCTTACAGATACGTCGGCGGCTATTGGGAAGCGAGAGAGAAAAAGAATTGGGATGGGATTCCTTATATATTTGGGCAGTCATGTGATTTGCCTTCCTGTTCTGAAGAGATTCTATCCTAG 2421 0.4267 MNPLCCIAPVSIDRDRANPVVPKSPAQCQLGVDASVKTVNYGSKPSFSTVDSSLGSDSNKASFTSNHDEEEVVVVNEARDSKVFSGTVAGILYKWVNYGKGWRSRWFMLEDGVLSYYKIHGPDKIWMSPARDRSIRVIGEESSKYMKKANWNLNRQGGATKQCKPFGEIHLKVSSVRGSKSDDKRLSIFTGTKTLHLRCISREDRSMWIEALQSAKDLFPRSLTSSDLATSEDIVVSTEKLRSRLSQEGISEAVIKDCESIMLSEVSYLQDRLKFLRQKHVMLLDTLKQLETEKIELETTVVDETKERESYCGQGNRRFSDFYSVMSEGSASDSVADNESQDGGDVETDDDDGTYFDTNEFLSSDALRSASYRSREGVGNSCIYDRDSFSSDGLHGLEKGIKDVKYPCVKRRDYLPEPKEKDKPVGLWSIIKDNIGKDLSGVCLPVYFNEPLSSLQKCFEDLEYSYLVDRALEWGKQGNDLMRILNIAAFAVSGYASTEGRQCKPFNPLLGETYEADYPDKGLRFFSEKVSHHPMVVACHCEGRGWKFWADSNLKGKFWGRSIQLDPVGVLTLQFEDGETFQWSKVTTSIYNIILGKIYCDHYGTMRIKGSGNYSCKLKFKEQSIIDRNPHQVHGFVQDNRTGEKVAMLIGKWDGSMYYVLGDPTTKPKGYDPMTEAVLIWERDPYVTKTRYNLSPFAISLNEITPGLLEKLPPTDSRLRPDQRHLENGEYELANADKLRLEQLQRQARSMQERGWQPRWFRKDEDGSYRYVGGYWEAREKKNWDGIPYIFGQSCDLPSCSEEILS 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1875 806 SUPERFAMILY Oxysterol-binding protein-like 422 793 IPR037239 -
Alju06g1875 806 Pfam Oxysterol-binding protein 427 780 IPR000648 GO:0008289
Alju06g1875 806 Coils Coil 273 307 - -
Alju06g1875 806 Pfam Pleckstrin homology domain 90 214 - -
Alju06g1875 806 SUPERFAMILY PH domain-like 88 222 - -
Alju06g1875 806 FunFam oxysterol-binding protein-related protein 1D isoform X1 512 685 - -
Alju06g1875 806 Gene3D - 85 219 IPR011993 -
Alju06g1875 806 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 87 779 IPR000648 GO:0008289
Alju06g1875 806 MobiDBLite consensus disorder prediction 330 352 - -
Alju06g1875 806 SMART PH_update 86 219 IPR001849 -
Alju06g1875 806 CDD PH_ORP_plant 88 221 - -
Alju06g1875 806 Gene3D - 512 678 - -
Alju06g1875 806 ProSiteProfiles PH domain profile. 85 217 IPR001849 -
Alju06g1875 806 FunFam Oxysterol-binding protein-related protein 2A 723 793 - -
Alju06g1875 806 Coils Coil 734 754 - -
Alju06g1875 806 Gene3D - 723 785 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1875 Alju-ChrAlju06 41973929 41980060 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g1875 06 41973929 41980060 Alju06g1875 06 41973929 41980060 ECH