Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1858 ATGATAGCCTCTCATCAAAGGCCACCCAAGAATCTCAAAACCTATGGTTCATGGGCTATTGTCACTGGTTCGACCGATGGAATTAGTAAAGCCATTTCCTTGGAACTGGCTTCCAAAGGACTCAGCATCCTTCTAGTTGGCATGGCAAACCCTTATCCGAGGTACTTTCATGAAAAAGACTTTGTATTTATTGAAGCAATTATCAAAGTGAACGTGGAAGCAATAACGTGGGTCACAAAGGCTGGGATTAAAGGAATGATCAGAAAGAAAGGAGCCATCATCAACATTGGTTCTGCTTCTTGTGCTGTAATTCCTTCCTATCTACTGTATTCACTCTATGTTGCTACTAAAGCGAATGTTACTTAA 366 0.4098 MIASHQRPPKNLKTYGSWAIVTGSTDGISKAISLELASKGLSILLVGMANPYPRYFHEKDFVFIEAIIKVNVEAITWVTKAGIKGMIRKKGAIINIGSASCAVIPSYLLYSLYVATKANVT 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1858 121 PANTHER RH59310P 46 120 - -
Alju06g1858 121 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 15 120 IPR036291 -
Alju06g1858 121 Gene3D - 45 121 - -
Alju06g1858 121 PRINTS Glucose/ribitol dehydrogenase family signature 113 121 IPR002347 -
Alju06g1858 121 PRINTS Glucose/ribitol dehydrogenase family signature 85 101 IPR002347 -
Alju06g1858 121 PRINTS Glucose/ribitol dehydrogenase family signature 18 35 IPR002347 -
Alju06g1858 121 Pfam short chain dehydrogenase 56 120 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1858 Alju-ChrAlju06 40268766 40269623 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1858 9 120 Lipid Metabolism Gene Families AT1G24470 35.714 1.21e-22 88.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g1858 06 40268766 40269623 Alju06g1858 06 40268766 40269623 CCT
Alju06g1858 06 40268766 40269623 Alju06g1858 06 40268766 40269623 ECH