Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0883 ATGTGTGAGGACGACGACCATGGGCGCTTAAATTATTGGACCCTTTTGCGGAAATTTCACCTCTTATATTATAGCCATAAATGGCTCGTCATTTTCTTTTTCACTTACCATAACGAGATCGCCTCAAGCGTGAGCCGTTCTAGACTCTTCAAAGCTGTGGTCCTAGATTTCGACAACCTCATGCCAAAGATCATGAAAATGGCTCAGAGCATTGAAATCCTTGAAGGCAATGGAGGACCTGGCACTCTCAGGAAGATCACTTTCGTTGAAGGTGGGGAAACAAAGTATGTGATGGAGAAATGGGAAGCTGCGGATGAAGCAAAGTATGTATATGGTTACAGCGTAATAGAAGGGAGTGGATTAGCAGAGGGAATGGAGAAGATAACTATTGAGCAGAAATTAGAGGAAGGAGCTAATGGAGGATGCGTAGGGAAGGACTCTATCACTTTCTTCACCAAATCCGATGCTCCTCCCTCTGATGTGGTGGTCGCTACTATAAAAGCCATTCGTGAGGGACTCACCAGGGCTGTTGAAGCTTACCTTTTGGCTCATCCTCATGAATACTAA 567 0.448 MCEDDDHGRLNYWTLLRKFHLLYYSHKWLVIFFFTYHNEIASSVSRSRLFKAVVLDFDNLMPKIMKMAQSIEILEGNGGPGTLRKITFVEGGETKYVMEKWEAADEAKYVYGYSVIEGSGLAEGMEKITIEQKLEEGANGGCVGKDSITFFTKSDAPPSDVVVATIKAIREGLTRAVEAYLLAHPHEY 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0883 188 ProSitePatterns Pathogenesis-related proteins Bet v I family signature. 118 150 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Alju06g0883 188 FunFam Major pollen allergen Bet v 1-A 32 188 - -
Alju06g0883 188 Gene3D - 33 187 IPR023393 -
Alju06g0883 188 SUPERFAMILY Bet v1-like 34 187 - -
Alju06g0883 188 PANTHER - 34 187 - -
Alju06g0883 188 PRINTS Major pollen allergen Bet V1 signature 139 155 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Alju06g0883 188 PRINTS Major pollen allergen Bet V1 signature 79 88 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Alju06g0883 188 PRINTS Major pollen allergen Bet V1 signature 33 53 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Alju06g0883 188 PRINTS Major pollen allergen Bet V1 signature 173 183 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Alju06g0883 188 PRINTS Major pollen allergen Bet V1 signature 95 114 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Alju06g0883 188 PRINTS Major pollen allergen Bet V1 signature 114 127 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Alju06g0883 188 PRINTS Major pollen allergen Bet V1 signature 56 66 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Alju06g0883 188 CDD Bet_v1-like 34 181 - -
Alju06g0883 188 Pfam Pathogenesis-related protein Bet v 1 family 34 184 IPR000916 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0883 Alju-ChrAlju06 8128476 8132193 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g0883 06 8128476 8132193 Alju06g0883 06 8128476 8132193 ECH