Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0869 ATGAAGATCAACGTAAACACCGTCGCTCGCAAAGTGGAGGTTGATAATCGCATACCCCTCCATTATTATTACCGAATTGCCGATAATCTCCTCAAACAGGCTAATATCTACCGGGAGGAGAACAATGTAGTCGACTTGTATATCATTCTTCTCCGATTTTCAAGTTTGGTTTCTGAAACTATACCATTTCATCGAGATTACCAAACGTCACTTCCCAAAGAAAAAACAGCATATAAGAAGAGATTGCTAGCTGTACTGGATGAGCTTGAATCTTTGAAACCAGAATTCAAACAAAAGGTTTACGAATTGAACGAGTTACATGGGAATGCTCACTTTCCTGAAGCTAATGACTCCAGCAAGGCTCAGCACAGTTCAGTGACTCCATCTTTGGAATGGCCTGATGTCAGTAACAATTCTTACTCACGAACGGATTCTAAACAGCTGCTGCCTGCTGTGGGTCTGCAGTCTTCATGGAAATTTAATAGTAATTCTGGTCCTTGCGCTTCAAATGCTGTGCCTATTGACAAGCAGCTTCAGAAACTATCTCTTAGTTTACTTGTTCCAAAGGAGGAGACTCTATCCAGACACTCATTTTTGGGACGAAATGGTCTTCGGGGCCAGTGGCTTGGACCAAGTGCAGGAATGAAGGTTAACTATCCAAGCAGTAGTGATTTGACTATTGCTGAGAATTCAAGTCTGAATCAGGATGGAAAATATGATCTTGTGGCCGTTAAAGAGGGTGATCCAGGAGCAGGCATGTCCACAATGGATTCAGTGCTCTCCTTGGATGATGGAAGTTGGTCACGTCCTGCTGATGAGTCATGTCCTCCTCTATTGAGTGAATCAGAGGACAGTCAATTCCTTTCACTCAACATTAGGCAACCTTCACCTCCTCCAGTTCTTGCTCAGGTTCAGCCAGAATATTCCCCAATTCCTCCTTCAAGAGTTGCAGATCCGAGACCAGGACCGGCCAAGTCTTCCCCAGATTCTCCACTTGGTTCTGCTGTATATCAGCACCTACATATTCCTGTCAAAATGATGGATGATTTTTTGAGATTGGCTCTGGAAAATACACGGAAAAACCTAGAGACTTGTGGTGTTCTTGCAGGGTCTCTGAAAAACAGGGTTTTCCATATTACTACACTCATAATCCCAAAGCAGGAATCAACATCTGACTCGTGCCAAACATTGAATGAGGAAGAGATATTTGAAGTTCAAGATCGTTTATCACTTTTTCCTTTAGGCTGGATACATACACACCCATCTCAGACTTGTTTCATGTCATCAGTGGATCTCCATACACATTACTCATACCAGATCATGTTACCAGAGGCAATCGCAATTGTCATGGCCCCTACAGATACAAAAAGTCCACATGGCATATTTCATCTGTCTGATCCTGGCGGCGTGTCAGTAATTCGCAACTGTCAGCAACGTGGATTTCATCCCCATGAGGAGCCTTCTGATGGAAGCTCTATTTATGAGCATTGCTCTCATGTCTTTATGAACGGTAACCTGAAATTTGATGTTGTTGACCTTCGGTAG 1545 0.4317 MKINVNTVARKVEVDNRIPLHYYYRIADNLLKQANIYREENNVVDLYIILLRFSSLVSETIPFHRDYQTSLPKEKTAYKKRLLAVLDELESLKPEFKQKVYELNELHGNAHFPEANDSSKAQHSSVTPSLEWPDVSNNSYSRTDSKQLLPAVGLQSSWKFNSNSGPCASNAVPIDKQLQKLSLSLLVPKEETLSRHSFLGRNGLRGQWLGPSAGMKVNYPSSSDLTIAENSSLNQDGKYDLVAVKEGDPGAGMSTMDSVLSLDDGSWSRPADESCPPLLSESEDSQFLSLNIRQPSPPPVLAQVQPEYSPIPPSRVADPRPGPAKSSPDSPLGSAVYQHLHIPVKMMDDFLRLALENTRKNLETCGVLAGSLKNRVFHITTLIIPKQESTSDSCQTLNEEEIFEVQDRLSLFPLGWIHTHPSQTCFMSSVDLHTHYSYQIMLPEAIAIVMAPTDTKSPHGIFHLSDPGGVSVIRNCQQRGFHPHEEPSDGSSIYEHCSHVFMNGNLKFDVVDLR 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0869 514 MobiDBLite consensus disorder prediction 248 332 - -
Alju06g0869 514 PANTHER AMSH-LIKE PROTEASE 3 514 - -
Alju06g0869 514 SMART pad1_6 339 467 IPR000555 GO:0005515|GO:0008233|GO:0008237
Alju06g0869 514 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 337 443 IPR000555 GO:0005515|GO:0008233|GO:0008237
Alju06g0869 514 MobiDBLite consensus disorder prediction 299 319 - -
Alju06g0869 514 Pfam USP8 dimerisation domain 7 99 IPR015063 -
Alju06g0869 514 MobiDBLite consensus disorder prediction 115 133 - -
Alju06g0869 514 CDD MPN_AMSH_like 337 514 IPR044098 GO:0016579|GO:0061578|GO:0070536|GO:0140492
Alju06g0869 514 FunFam AMSH-like ubiquitin thioesterase 3 1 116 - -
Alju06g0869 514 Gene3D Cytidine Deaminase, domain 2 327 514 - -
Alju06g0869 514 MobiDBLite consensus disorder prediction 112 133 - -
Alju06g0869 514 FunFam AMSH-like ubiquitin thioesterase 3 325 514 - -
Alju06g0869 514 Gene3D - 3 125 - -
Alju06g0869 514 ProSiteProfiles MPN domain profile. 340 470 IPR037518 -
Alju06g0869 514 MobiDBLite consensus disorder prediction 279 298 - -
Alju06g0869 514 SUPERFAMILY JAB1/MPN domain 339 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0869 Alju-ChrAlju06 8021402 8028015 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g0869 06 8021402 8028015 Alju06g0869 06 8021402 8028015 ECH