Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0814 ATGGCAACTGGACAACTGTTCTCCCGTACCACACAAGCATTATTTTACAACTACAAGCAACTTCCTATCCAGCGGATGCTTGATTTTGACTTCCTATGTGGTAGGGAGACGCCATCAGTTGCTGGAATCATTAATCCTGGTTCTGAGGGATTTCAGAAGCTCTTTTTTGGTCAAGATGAAATTGCAATCCCAGTGCATTCTACCATTGAAGCAGCTTGTGCTGCACATCCTACTGCTGATGTCTTCATCAATTTTGCATCATTTAGGAGTGCTGCTGCTTCATCCATGGCTGCATTGAAGCAGCCAACAATTAGAGTTGTTGCTATTATTGCTGAAGGTGTACCTGAATCTGACACCAAGCATTTGATTGCATATGCCCGGTCAAACAATAAGGTTGTTATCGGGCCAGCCACTGTTGGAGGTATTCAAGCTGGTGCTTTTAAGATAGGTGACACGGCTGGAACAATTGACAATATTATTCAATGCAAGCTGTACAGGCCTGGATCTGTTGGTTTTGTTTCTAAATCAGGTGGGATGTCCAACGAATTGTACAACAGTATTGCTCGGGTAACAGATGGAATTTATGAAGGCATTGCGATTGGAGGAGATGTTTTTCCTGGTTCTACTCTTTCTGATCATATTTTGCGGTATAACAACATACCCCAGGTTAAAATGATGGTAGTGCTTGGGGAATTGGGCGGACGGGATGAGTATTCTCTCGTGGAAGCCCTAAAACATGGGAAAGTGACAAAACCGGTTGTTGCCTGGGTCAGTGGAACCTGTGCACGACTCTTCAAGTCTGAAGTACAATTTGGTCATGCTGGAGCTAAAAGTGGTGGTGAAATGGAGTCTGCTCAAGCAAAGAATCAAGCACTTACAGAAGCTGGAGCTATTGTTCCCACTTCATATGAAGCTTTTGAAGCTGCAATTAAGGAAACATTTGACAAATTGGTAAAAGAAGGAAAAATCACGCCAGTGAAGGAGTTTACTCCTCCAGAGATTCCTGAGGACCTTAATTCTGCAATTAGGAACGGAAAAGTCCGTGCTCCAACTCATATTATTTCCACCATCTCTGATGATAGAGGCATGTTGGGATCCATCATTCATTACTTTTGTGAGGAGCCATGCTATGCTGGTGTTCCCATGTCTAACATTATTGAAAAAGGTTTGGGTGTAGGTGATGTTATATCTCTCCTGTGGTTTAAACGCAGCCTTCCTCGTTATTGCACAAAATTTATCGAGATATGCATCATGCTATGTGCCGACCATGGTCCTTGCGTCTCTGGCGCTCACAATGCTATAGTGACAGCGAGGGCAGGGAAGGACCTTGTCTCCAGCCTGGTATCAGGTTTGCTTACAATTGGTCCTCGATTTGGTGGTGCCATTGATGATGCTGCTCGCTACTTCAAGGATGCTTATGACAGGAATCTTACACCTTACGAATATGTTGAAGGTATGAAGAAGAAGGGCATCCGTGTGCCAGGAATAGGGCACAGGATCAAGAGCAGAGACAACAGAGATAAGAGAGTAGAGTTGCTACAGAAGTTTGCAAACACCCATTTTCCTTCTGTAAAATACATGGAATATGCCGTTAAGGTTGAAAACTACACCCTTACAAAGGCAAATAACCTGGTTCTCAATGTAGATGGTGCAATTGGGTCCCTTTTCTTGGATCTTCTTTCTGGCAGTGGGATGTTCACCAAGCAAGAGATCGATGAAATTGTCGAGATTGGCTATCTGAATGGGCTATTTGTTCTGGCTCGCTCCATTGGCCTCATTGGGCATACCTTTGACCAGAAGAGATTGAAACAACCACTGTATCGCCACCCATGGGAGGATGTTCTCTACGCGAAGTGA 1857 0.441 MATGQLFSRTTQALFYNYKQLPIQRMLDFDFLCGRETPSVAGIINPGSEGFQKLFFGQDEIAIPVHSTIEAACAAHPTADVFINFASFRSAAASSMAALKQPTIRVVAIIAEGVPESDTKHLIAYARSNNKVVIGPATVGGIQAGAFKIGDTAGTIDNIIQCKLYRPGSVGFVSKSGGMSNELYNSIARVTDGIYEGIAIGGDVFPGSTLSDHILRYNNIPQVKMMVVLGELGGRDEYSLVEALKHGKVTKPVVAWVSGTCARLFKSEVQFGHAGAKSGGEMESAQAKNQALTEAGAIVPTSYEAFEAAIKETFDKLVKEGKITPVKEFTPPEIPEDLNSAIRNGKVRAPTHIISTISDDRGMLGSIIHYFCEEPCYAGVPMSNIIEKGLGVGDVISLLWFKRSLPRYCTKFIEICIMLCADHGPCVSGAHNAIVTARAGKDLVSSLVSGLLTIGPRFGGAIDDAARYFKDAYDRNLTPYEYVEGMKKKGIRVPGIGHRIKSRDNRDKRVELLQKFANTHFPSVKYMEYAVKVENYTLTKANNLVLNVDGAIGSLFLDLLSGSGMFTKQEIDEIVEIGYLNGLFVLARSIGLIGHTFDQKRLKQPLYRHPWEDVLYAK 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0814 618 Gene3D - 138 323 IPR016102 -
Alju06g0814 618 CDD CCL_ACL-C 379 616 - -
Alju06g0814 618 FunFam ATP-citrate synthase subunit 138 323 - -
Alju06g0814 618 ProSitePatterns ATP-citrate lyase / succinyl-CoA ligases family active site. 259 275 IPR017440 -
Alju06g0814 618 Gene3D - 2 137 - -
Alju06g0814 618 PANTHER ATP-CITRATE SYNTHASE 5 617 IPR002020 GO:0006099|GO:0046912
Alju06g0814 618 ProSitePatterns ATP-citrate lyase / succinyl-CoA ligases family signature 3. 168 193 IPR017866 -
Alju06g0814 618 Gene3D - 460 557 IPR016143 -
Alju06g0814 618 ProSitePatterns ATP-citrate lyase / succinyl-CoA ligases family signature 1. 174 203 IPR033847 -
Alju06g0814 618 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 136 IPR036291 -
Alju06g0814 618 FunFam ATP-citrate synthase beta chain protein 2 137 - -
Alju06g0814 618 SUPERFAMILY Citrate synthase 130 614 IPR036969 GO:0046912
Alju06g0814 618 FunFam ATP-citrate synthase subunit 1 465 558 - -
Alju06g0814 618 Pfam CoA-ligase 174 297 IPR005811 GO:0003824
Alju06g0814 618 Pfam Citrate synthase, C-terminal domain 398 608 IPR002020 GO:0006099|GO:0046912
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0814 Alju-ChrAlju06 7476537 7480956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0814 1 618 Acyl Lipid Metabolism Gene Families AT5G49460 91.262 0.0 1130
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g0814 06 7476537 7480956 Alju06g0814 06 7476537 7480956 ECH