Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0801 ATGTGTCCTTCCGGACGCTCCCTCTCTCCTCCCTTCGCCTCCGCCGCCTCCACCTCTTCTGCTGCTGGATCCGCCATCGACTCGTCTTTCCGACCAGCATTTGATGTCCTTGATTGTGACCGCGACGGCAAGATTAGCCGCGACGATCTTCGGGCATTCTACGCCGGCGGGGATGCCGCCGACGTCGACGACGACCTCATTGGGACGATGATGATGGTGGCGGATACCAACAAGGACGGTTTCGTGGAGTACGATGAGTTCGAGAGGGTGGTTCTGGGCGGGGGTGGCAGGAAGAACGGGTCTATGAGTTCGGCGACGACGTTTTTGAAGGAGATGTTCAAAGTGATGGACAAGGACGGAGACGGTCAACTCAGCCACCGGGATTTGAAGAGCTTCATGGAAATGGCTGGTCTCGCCATTACCGACGAAGACATCGATGCAATGATCATTTTGGCCGGTGGCGATCGAAACGGCGGCGTCACATTCGAAGGCTTGCATGGAATATTAATGAACCGTTGA 519 0.5626 MCPSGRSLSPPFASAASTSSAAGSAIDSSFRPAFDVLDCDRDGKISRDDLRAFYAGGDAADVDDDLIGTMMMVADTNKDGFVEYDEFERVVLGGGGRKNGSMSSATTFLKEMFKVMDKDGDGQLSHRDLKSFMEMAGLAITDEDIDAMIILAGGDRNGGVTFEGLHGILMNR 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0801 172 SUPERFAMILY EF-hand 27 170 IPR011992 -
Alju06g0801 172 ProSitePatterns EF-hand calcium-binding domain. 75 87 IPR018247 -
Alju06g0801 172 PANTHER CALCIUM BINDING PROTEIN 109 163 - -
Alju06g0801 172 Pfam EF-hand domain pair 30 90 IPR002048 GO:0005509
Alju06g0801 172 ProSitePatterns EF-hand calcium-binding domain. 117 129 IPR018247 -
Alju06g0801 172 SMART efh_1 29 57 IPR002048 GO:0005509
Alju06g0801 172 SMART efh_1 66 94 IPR002048 GO:0005509
Alju06g0801 172 SMART efh_1 108 136 IPR002048 GO:0005509
Alju06g0801 172 SMART efh_1 144 172 IPR002048 GO:0005509
Alju06g0801 172 FunFam Calmodulin-2 A 25 172 - -
Alju06g0801 172 ProSitePatterns EF-hand calcium-binding domain. 38 50 IPR018247 -
Alju06g0801 172 Gene3D - 95 172 - -
Alju06g0801 172 Gene3D - 11 92 - -
Alju06g0801 172 ProSiteProfiles EF-hand calcium-binding domain profile. 104 139 IPR002048 GO:0005509
Alju06g0801 172 CDD EFh 109 163 IPR002048 GO:0005509
Alju06g0801 172 CDD EFh 30 87 IPR002048 GO:0005509
Alju06g0801 172 ProSiteProfiles EF-hand calcium-binding domain profile. 62 97 IPR002048 GO:0005509
Alju06g0801 172 Pfam EF hand 109 135 IPR002048 GO:0005509
Alju06g0801 172 ProSiteProfiles EF-hand calcium-binding domain profile. 33 60 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0801 Alju-ChrAlju06 7349728 7350246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0801 1 169 EF-hand Containing Proteins AT5G49480 52.353 6.16e-51 159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g0801 06 7349728 7350246 Alju06g0801 06 7349728 7350246 ECH