LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju06g0777	ATGACGTTTGTAGCTCTCTTCGTTACCGCCACGAAGCTCGCCGGAGCAATTGTCACGATCACCGTCGCTGCTAATGCCTTCTCATTCTCCCGTTTCAAGAAAAAAAATCTCCGCCCATTCCGCTTGCCTATTGACGAGTCCTCTGATGTACTCGCTGACTTCAGTGTTGATGAAGAGAAAAATGGTTTTTTCTTTGGCCTGGCTACTGCACCGGCACATGTTGAGGATAGGCTTAATGATGCTTGGATTCAGTTTGCAGAGGAACAAAAGCCTGACGGTGACTCACAAGAGGTCAAACAGCAAGCTGATGCTTTGTTGGGCTCTGCTACTGGTGATGGTGGGTCTCACCAAGCTTCTTCATCTCGACAACATGATTGTTCCACTGTCAAAAAGAGAAAAAAGCCTTTAAAGGTTGCTATGGAGGCCATGATTAGAGGATTTGAGAAGTACTCAGAAGAAGATGAAGAAGAAGCACCAGCTGCTGTGCCAAAAGAAGAACAGCAACACAATGTAACTGCTTGGCATAATGTTCCACACCCGGAGGAGAGATTAAGGTTTTGGTCTGATCCTGATACAGAACTGAAGTTGGCCAAAGATACTGGTGTTACTGTCTTTCGCATGGGTATAGATTGGTCAAGAATAATGCCAAAGGAGCCTGTAAATGGGCTAACAGAATCTGTTAATTATGCTGCTTTGGAGCGTTACAAATGGATTATCAATAGGGTTCGGTCATATGGAATGAAGGTCATGCTCACTCTTTTTCATCACTCACTACCACCCTGGGCTGGTGAGTATGGAGGTTGGAAGCTGGAAAAGACTGTTGATTATTTCATGGACTTTGCCAGGCTTGTTGTAAACAGTGTATCTGATCTGGTAGAATATTGGGTTACTTTTAATGAACCGCATGTCTTCTGTATGCTTACCTATTGTGCTGGAGCTTGGCCTGGTGGTAATCCTGATATGCTGGAGGTTGCTACTTCTGCTCTTCCAACTGGTGTTTTCCAACAGGCCATGCATTGGATGGCCATTGCACACTCAAAAGCATATGATTATATCCACGAACAAAGTGACTCATTAAAACCCATAGTTGGTGTAGCTCACCATGTGTCATTCATGCGACCCTATGGTCTGTTTGATGTTGCTGCTGTTTCACTGGCTAATTCCTTGACTCTCTTCCCGTACGTTGATAGTATTTCTGACAAGCTGGATTTTATAGGCATAAACTACTATGGGCAGGAAGTTGTCTCTGGTGCGGGACTGAAACTTGTGGAAACAGATGAGTACAGTGAATCTGGTCGTGGGGTATATCCTGATGGCCTGTATCGCATGTTGCTTCAGTTCCATGAAAGATACAAACATCTTAATGTTCCCTTCATCATTACTGAAAACGGAGTATCAGATGAAACAGATGTAATCCGACGGCCATATCTGTTGGAACATTTGCTTGCTGTATATGCAGCCATGATAATGGGTGTTCCTGTGCTTGGTTACCTGTTTTGGACTATTTCTGATAACTGGGAGTGGGCTGATGGATATGGTCCCAAGTTTGGACTTGTAGCAGTTGACCGAGCTAATAATCTTGCACGCAAACCCCGCCCCTCGTACCACCTATTTTCTAAAATTGTGAACACGGGTAAAGTCACACGTGAAGATCGCGACAGAGAATGGAATGAACTACAGAGAGCTGCCAATGAGAAGCAAACAAGACCATTTTATCGGGCTGTAGACGAGCACGGTTTGATGTATGCAGGTGGACTCAATGAACCTCTTCAGCGACCTTATATTGAGAGAGATTGGCGGTTTGGTCACTATGAGATGGATGGTCTACAAGATCCTTTGAGCCGCTTCTCAAGATTCATTATCCGGCCATTCTCCCTGAAAAGGAAAAGGAAACCTCAGAAGAGTGACACATTGGTTCTTCAGCCTCTTGAAGCAACGAACTGCCGCGCCGTTCGTAGGCGCCCACCATTCTTTGGATCTGCCCACTCATTCACTATGGCTAGTCTCGAACCCAAGTGCTGGCTGGACGATCCCTTGTGGGAGATTGCATTCGGCCACGAGTTGGAAACTGCAGCAAGTTTCTGTCCAGGTCGTGAGGGAACGAAGAATTTTTTATTCTGA	2121	0.4536	MTFVALFVTATKLAGAIVTITVAANAFSFSRFKKKNLRPFRLPIDESSDVLADFSVDEEKNGFFFGLATAPAHVEDRLNDAWIQFAEEQKPDGDSQEVKQQADALLGSATGDGGSHQASSSRQHDCSTVKKRKKPLKVAMEAMIRGFEKYSEEDEEEAPAAVPKEEQQHNVTAWHNVPHPEERLRFWSDPDTELKLAKDTGVTVFRMGIDWSRIMPKEPVNGLTESVNYAALERYKWIINRVRSYGMKVMLTLFHHSLPPWAGEYGGWKLEKTVDYFMDFARLVVNSVSDLVEYWVTFNEPHVFCMLTYCAGAWPGGNPDMLEVATSALPTGVFQQAMHWMAIAHSKAYDYIHEQSDSLKPIVGVAHHVSFMRPYGLFDVAAVSLANSLTLFPYVDSISDKLDFIGINYYGQEVVSGAGLKLVETDEYSESGRGVYPDGLYRMLLQFHERYKHLNVPFIITENGVSDETDVIRRPYLLEHLLAVYAAMIMGVPVLGYLFWTISDNWEWADGYGPKFGLVAVDRANNLARKPRPSYHLFSKIVNTGKVTREDRDREWNELQRAANEKQTRPFYRAVDEHGLMYAGGLNEPLQRPYIERDWRFGHYEMDGLQDPLSRFSRFIIRPFSLKRKRKPQKSDTLVLQPLEATNCRAVRRRPPFFGSAHSFTMASLEPKCWLDDPLWEIAFGHELETAASFCPGREGTKNFLF	706

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju06g0777	706	PRINTS	Glycosyl hydrolase family 1 signature	470	481	IPR001360	GO:0004553\|GO:0005975
	Alju06g0777	706	PRINTS	Glycosyl hydrolase family 1 signature	515	527	IPR001360	GO:0004553\|GO:0005975
	Alju06g0777	706	PRINTS	Glycosyl hydrolase family 1 signature	491	508	IPR001360	GO:0004553\|GO:0005975
	Alju06g0777	706	PRINTS	Glycosyl hydrolase family 1 signature	458	466	IPR001360	GO:0004553\|GO:0005975
	Alju06g0777	706	PRINTS	Glycosyl hydrolase family 1 signature	401	415	IPR001360	GO:0004553\|GO:0005975
	Alju06g0777	706	SUPERFAMILY	(Trans)glycosidases	166	550	IPR017853	-
	Alju06g0777	706	Gene3D	Glycosidases	144	556	-	-
	Alju06g0777	706	PANTHER	GLYCOSYL HYDROLASE	133	394	IPR001360	GO:0004553\|GO:0005975
	Alju06g0777	706	ProSitePatterns	Glycosyl hydrolases family 1 active site.	458	466	IPR018120	-
	Alju06g0777	706	MobiDBLite	consensus disorder prediction	107	132	-	-
	Alju06g0777	706	Pfam	Glycosyl hydrolase family 1	191	376	IPR001360	GO:0004553\|GO:0005975
	Alju06g0777	706	Pfam	Glycosyl hydrolase family 1	396	544	IPR001360	GO:0004553\|GO:0005975

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Alju06g0777	Alju-ChrAlju06	7139374	7149050	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju06g0777	6	621	Glycoside Hydrolase	AT3G06510	62.673	0.0	853

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Alju06g0777	06	7139374	7149050	Alju06g0777	06	7139374	7149050	ECH