Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0764 ATGCCCAAGCAACTAGAGAGTGACGAAGCACTATCCGAAGCAAGCGAGGAAGGAGAGACGTGCGACATGGCGATGTCTCTGGCTCAGCAATTCACCGGCCTCCGCTGCTGTTCTCCTCTCTCTTCTCCTCCTCGCTCTAACCCCTTCGCTGCTCCCAACAACCATAAGCGTAATCCCCTTCCCATTGTCGCCTCCGTCGCAATCTCTAATGCGCAGACCAAAGAGAGGGAAAAGCTCAAACAGCTCTTCGAAGAAGCCTACGAGCGTTGCCGCACTGCTCCCACGGAAGGCGTTTCCTTCACTCTCGAAGAGTTTAATTCCGCTCTCGATAAGTATGACTTCGATTCTGAAATTGGCACCAAGGTTAAAGGAACTGTTTTTAATGTAGATGCTTATGGAGCTCTTGTTGATATAACTGCAAAGTCGTCAGCATTCTTGCCTCTCCAAGAGGCATGCATCCACAGAATTAAACATGTACAAGAAGCAGGCATAGTTCCTGGCTTGAGAGAGGAGTTTGTAATCATTGGTGAAAATGAAGCTGATGATAGCTTGATCTTGAGTTTAAGGAGTATCCAGTATGACCTTGCTTGGGAACGCTGTAGACAACTTCAAGCAGAAGATGTTGTTGTCAAGGGTAAGATTGTCGGTGCTAACAAAGGTGGAGTTGTGGCTTTGATTGAAGGCCTTAGAGGGTTTGTTCCTTTCTCACAAATATCATCGAAATCAACTGCAGAAGAGCTTCTTGAGAAGGAGCTTCCTCTGAAGTTTGTGGAGGTGGATGAGGAACAGTCTAGACTTATTCTCAGTAACCGCAAGGCCATGGCTGACAGCCAGGCCCAGCTAGGCATTGGATCAGTGGTCACCGGTTCTGTTCAAAGTCTAAAGCCATATGGTGCCTTCATTGACATTGGTGGAATTAATGGCCTTCTTCATGTCAGTCAGATCAGTCATGATCGGGTAACTGATATCTCAACTGTTCTTCAACCTGGTGATACTCTCAAGGTGATGATCTTAAGTCATGATCGGGAGAGAGGCCGAGTAAGTCTCTCCACAAAGAAGTTAGAACCCACACCAGGAGACATGATTCGCAATCCTAAGCTTGTTTTTGAGAAGGCTGAGGAGATGGCCCAAACATTCAGACAGAGAATTGCTCAAGCTGAAGCTATGGCTCGTGCAGACATGCTTAGGTTCCAGCCTGAGAGTGGATTAACTCTCAGCAGTGATGGGATATTGGGACCACTTTCTTCAGACTTGCCTGCAGAGGGACTGGATTTGAGTGAAGTGCCCCCCGCCGATGAATCAGAAGTAGATGAATCAGAAGCAGAATAA 1329 0.4725 MPKQLESDEALSEASEEGETCDMAMSLAQQFTGLRCCSPLSSPPRSNPFAAPNNHKRNPLPIVASVAISNAQTKEREKLKQLFEEAYERCRTAPTEGVSFTLEEFNSALDKYDFDSEIGTKVKGTVFNVDAYGALVDITAKSSAFLPLQEACIHRIKHVQEAGIVPGLREEFVIIGENEADDSLILSLRSIQYDLAWERCRQLQAEDVVVKGKIVGANKGGVVALIEGLRGFVPFSQISSKSTAEELLEKELPLKFVEVDEEQSRLILSNRKAMADSQAQLGIGSVVTGSVQSLKPYGAFIDIGGINGLLHVSQISHDRVTDISTVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVFEKAEEMAQTFRQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLSSDLPAEGLDLSEVPPADESEVDESEAE 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0764 442 PANTHER 30S RIBOSOMAL PROTEIN S1 69 422 - -
Alju06g0764 442 Gene3D - 102 199 IPR012340 -
Alju06g0764 442 SUPERFAMILY Nucleic acid-binding proteins 114 214 IPR012340 -
Alju06g0764 442 FunFam 30S ribosomal protein S1 280 359 - -
Alju06g0764 442 Gene3D - 200 278 IPR012340 -
Alju06g0764 442 Gene3D - 279 356 IPR012340 -
Alju06g0764 442 SMART S1_6 282 352 IPR022967 -
Alju06g0764 442 SMART S1_6 205 271 IPR022967 -
Alju06g0764 442 SMART S1_6 117 189 IPR022967 -
Alju06g0764 442 MobiDBLite consensus disorder prediction 428 442 - -
Alju06g0764 442 SUPERFAMILY Nucleic acid-binding proteins 283 362 IPR012340 -
Alju06g0764 442 PRINTS Ribosomal protein S1 signature 119 137 IPR035104 -
Alju06g0764 442 PRINTS Ribosomal protein S1 signature 210 226 IPR035104 -
Alju06g0764 442 PRINTS Ribosomal protein S1 signature 228 245 IPR035104 -
Alju06g0764 442 PRINTS Ribosomal protein S1 signature 137 151 IPR035104 -
Alju06g0764 442 ProSiteProfiles S1 domain profile. 119 189 IPR003029 GO:0003676
Alju06g0764 442 CDD S1_RPS1_repeat_hs4 284 352 - -
Alju06g0764 442 Coils Coil 369 389 - -
Alju06g0764 442 FunFam 30S ribosomal protein S1, chloroplastic 201 277 - -
Alju06g0764 442 CDD S1_RPS1_repeat_ec2_hs2 207 271 - -
Alju06g0764 442 FunFam 30S ribosomal protein S1 103 200 - -
Alju06g0764 442 ProSiteProfiles S1 domain profile. 207 271 IPR003029 GO:0003676
Alju06g0764 442 Pfam S1 RNA binding domain 205 269 IPR003029 GO:0003676
Alju06g0764 442 Pfam S1 RNA binding domain 283 352 IPR003029 GO:0003676
Alju06g0764 442 Pfam S1 RNA binding domain 117 189 IPR003029 GO:0003676
Alju06g0764 442 SUPERFAMILY Nucleic acid-binding proteins 202 275 IPR012340 -
Alju06g0764 442 ProSiteProfiles S1 domain profile. 284 352 IPR003029 GO:0003676
Alju06g0764 442 MobiDBLite consensus disorder prediction 406 442 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g0764 06 6949210 6954356 Alju06g0764 06 6949210 6954356 ECH