Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0176 ATGGGGGTAACTAAAAGTTGGGTTCTGCTTTTTCTAGCTCTGGTATTGCTGAACCAGCTGGTTGTGAATGGGGATGAGAATACGAAGACTCTGGTGAAGTATAAGAAGGGGAAGAAGCTCTGCGACAAAGGGTGGGAATGCAGGGGATGGTCTCAATACTGTTGTAATCTGACTATCACTGATTACTTCCAGACCTACCAGTTTGAGAATCTCTTTTCTAAGCGTAACTCACCTGTGGCACACGCAGTAGGTTTCTGGGATTATCATTCTTTCATTGCTGCTGCTGCACTTTTTGAGCCATTGGGCTTCGGCACCACCGGTAATAAGACCATGCAGATGAAGGAAATTGCAGCTTTCTTGGGTCATGTCGGCTGTAAAACTTCTTGTGGTTATGGAGTGGCCACTGGAGGACCTTTGGCCTGGGGTCTTTGTTACAATCGCGAAATGAGTCCTAGTCAGTCATACTGTGATGACTATTTTAAGTACACCTACCCTTGTGCCCCCGGTGCTGAATATTATGGACGCGGTGCCCTGCCTATCTTCTGGAACTACAACTATGGTGCTGCTGGAGAAGCTTTGAAGGTAGATCTACTAAATCATCCAGAATACGTTGAGCAGAATGCAACCCTGGCCTTCCAGGCTGCAATTTGGAGGTGGATGACCCCGATCAAGAAGAAACAACCTTCGGCACATGATGTCTTTGTTGGCAACTGGAAGCCAACCAAGAACGACACAATAGTGAATCGGGTTCCTGGTTTTGGCGCCACAATGAACATTCTATACGGCGATGGTGTGTGTGGGCAAGGTGATGTTGACTCCATGAACAACATCGTTTCCCATTACCTGTATTATCTCGACCTGCTTGGCGTTGGCCGTGAGGAGGCAGGGCCCCATGAATTGCTTACTTGTGCCGAGCAGGTTCCTTTCAACCCGTCATCTACTGCCACTGCAGCTTCTTGA 960 0.4802 MGVTKSWVLLFLALVLLNQLVVNGDENTKTLVKYKKGKKLCDKGWECRGWSQYCCNLTITDYFQTYQFENLFSKRNSPVAHAVGFWDYHSFIAAAALFEPLGFGTTGNKTMQMKEIAAFLGHVGCKTSCGYGVATGGPLAWGLCYNREMSPSQSYCDDYFKYTYPCAPGAEYYGRGALPIFWNYNYGAAGEALKVDLLNHPEYVEQNATLAFQAAIWRWMTPIKKKQPSAHDVFVGNWKPTKNDTIVNRVPGFGATMNILYGDGVCGQGDVDSMNNIVSHYLYYLDLLGVGREEAGPHELLTCAEQVPFNPSSTATAAS 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0176 319 CDD chitinase_GH19 67 290 - -
Alju06g0176 319 FunFam Endochitinase (Chitinase) 147 206 - -
Alju06g0176 319 SUPERFAMILY Lysozyme-like 59 310 IPR023346 -
Alju06g0176 319 Gene3D Endochitinase, domain 2 147 206 - -
Alju06g0176 319 PIRSF Endochitinase 1 310 IPR016283 GO:0004568|GO:0005975
Alju06g0176 319 Pfam Chitinase class I 67 293 IPR000726 GO:0004568|GO:0006032|GO:0016998
Alju06g0176 319 PANTHER CHITINASE-RELATED 9 306 - -
Alju06g0176 319 Gene3D - 67 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0176 Alju-ChrAlju06 1352944 1355060 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g0176 6 314 Glycoside Hydrolase AT1G05850 74.110 0.0 500
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g0176 06 1352944 1355060 Alju06g0176 06 1352944 1355060 ECH