Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g0090 ATGGTGAAGAAGCGGGTCCCCGACTGGCTTAACAGTTCTCTCTGGTCTTCCACTCCTTCCTCTGACGACCACCGTGGTCTCCGCCCCTCCACCACCGCATCCACCAACACCTACGCCGATGAAGAGCGAGAGCAATCCGCGGTGGACCCACCTTTACCTGCACCTTCTCCTCCTCCTTCACCACCGGTCAGAGAAGATCCTCCACAGCCCCAGATAATCGAAGATTCAAGAATCAATCATGTTGCTAACGATCACAATGTCACTTCTTCTACTCCTTCTACAGATGACATCTCTCGCCAGGCTCAATTGCTGGCCGAGCTATCAAGAAAGGTGATAGATATGAGGGAGTTACGGAGAATTGCATGTCAAGGTATACCTGATGGTACTGGGATACGTTCTACTGTGTGGAAGCTTTTGCTCGGATATCTTCCACTGGATCGAGGTCTTTGGTCATCTGAATTAGCTAAGAAGAGGTCTCAATATAAGCATTTCAAAGAGGAGATCCTGATGAATCCTTCAGAAATTACAAGGAGGATGTACAGCTCTACAAGTGACACTTCTGATGCAAAATATGGGAGTCGGGGCTTGCTCTCTAGATCTGAAGTCACTCACGGGGAACATCCCTTGAGTCTTGGAAAGACTAGCATATGGAATCAGTTCTTCCAGGACACTGAGATAATAGAGCAAATTGATCGAGATGTAAAGCGCACTCATCCTGATATGAATTTTTTTTCCAGTGACTCACAGTTTGCAAAATCAAATCAGGAGGCTTTGAAGAACATATTAATTATTTTTGCAAAGTTAAATCCAGGCGTAAGATATGTTCAAGGGATGAATGAGATATTGGCTCCTCTGTTCTATGTGTTTAAAAATGATTCTGATGAAGAAAATACAGCCTTTGTCGAAGCAGACACATTCTTTTGTTTTGTCGAGCTATTAAGTGGATTCCGAGATAATTTTTGTCAACAACTTGACAACAGTGTTGTGGGAATCCGTTCCACTATTGCTCGATTATCACAGCTTTTGAGACAACATGATGAAGAGCTGTGGCGTCATCTTGAGATCACAACCAAAGTCAATCCCCAATTCTATGCGTTTAGGTGGATTACTCTCCTCTTGACTCAGGAATTCAATTTTGCTGACTGCCTTTTCATTTGGGACACTCTTCTAAGTGATCCAGAAGGTCCACAGGAGACTCTGTTACGGATATGCTGTGCAATGCTAATTCTTGTTCGGAGACGCCTTCTCGCGGGTGATTTCACTTCCAATCTCAAGTTGCTGCAAAATTACCCGTCTACAAACATAAGCCATTTGCTCTATGTTGCCAATAAGTTACGGGTACAAGGAGTCTAA 1353 0.4412 MVKKRVPDWLNSSLWSSTPSSDDHRGLRPSTTASTNTYADEEREQSAVDPPLPAPSPPPSPPVREDPPQPQIIEDSRINHVANDHNVTSSTPSTDDISRQAQLLAELSRKVIDMRELRRIACQGIPDGTGIRSTVWKLLLGYLPLDRGLWSSELAKKRSQYKHFKEEILMNPSEITRRMYSSTSDTSDAKYGSRGLLSRSEVTHGEHPLSLGKTSIWNQFFQDTEIIEQIDRDVKRTHPDMNFFSSDSQFAKSNQEALKNILIIFAKLNPGVRYVQGMNEILAPLFYVFKNDSDEENTAFVEADTFFCFVELLSGFRDNFCQQLDNSVVGIRSTIARLSQLLRQHDEELWRHLEITTKVNPQFYAFRWITLLLTQEFNFADCLFIWDTLLSDPEGPQETLLRICCAMLILVRRRLLAGDFTSNLKLLQNYPSTNISHLLYVANKLRVQGV 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g0090 450 Pfam Rab-GTPase-TBC domain 223 414 IPR000195 -
Alju06g0090 450 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 93 428 - -
Alju06g0090 450 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 330 447 IPR035969 -
Alju06g0090 450 FunFam TBC1 domain family member 13 210 321 - -
Alju06g0090 450 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 105 352 IPR035969 -
Alju06g0090 450 Gene3D - 329 449 - -
Alju06g0090 450 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 212 321 - -
Alju06g0090 450 MobiDBLite consensus disorder prediction 10 41 - -
Alju06g0090 450 MobiDBLite consensus disorder prediction 50 68 - -
Alju06g0090 450 ProSiteProfiles TBC/rab GAP domain profile. 126 393 IPR000195 -
Alju06g0090 450 SMART tbc_4 121 419 IPR000195 -
Alju06g0090 450 MobiDBLite consensus disorder prediction 1 70 - -
Alju06g0090 450 FunFam TBC1 domain family member 13 328 449 - -
Alju06g0090 450 Gene3D - 96 149 - -
Alju06g0090 450 FunFam TBC1 domain family member 98 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g0090 Alju-ChrAlju06 688280 692322 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g0090 06 688280 692322 Alju06g0090 06 688280 692322 ECH