Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g2112 ATGCCGGGTCTCGTAGCCGTGAAAACCCCACCTCAAACGATGCCGTTCGGGGTCTCGGCCACCGGATATTCCAATGGCGGCGAACAAAGACCTTCTTCGCCCATCGTGAAGCGAAGCTTAAAGAAGTCACAGGAAAACCTGATCGCCGACGATTCCTCCGTCGACAACCCGGACTTGGGTCCATTTCTTCTGAAGCTAGCCCGAGACGCGATAGCTTCGGGCGAGAACCCGAACAAGGCGTTGGACCTTGCGATCCGGGCGTCCAAATCGTTCGAGCAATGTTCGGGGCCGGGCCTGGAGCTTGCCATGTGTTTGCACGTTGTGGCGGCGATCTACAGTAGTTTGGGGCGGTTCGGGGAGGCGATTCACGAGATGGAGCGGTCCATTGAGTTTCCGGATCCCGGAAAAGGGTCGGATCATGCCATGGCGAAGTTTTCCGGGTACATGCAGTTAGGGGATACATATTCGATGATTGGGCAGCTGCAACGGTCTATCAAGTGTTACAGTTCGGGTTTGCAGATCCAAATGGAGGCTTTGGGAAAGTCCGACCCGAGAGTCGCAGAGACTTGCAGGTACTTAGCTGAAGCCCATGTTCAAGCTATGCAATTTGATGAGGCAGAGAACTTCTGCAAGAAGGCTCTTGAAATTCACTGGGAGCATAGCTCCCCAGCGTCCCTTCCTGAAGCAGCTGATCGGCGCCTTATGGCTCTCATTTGTGATGCAAAGGGAGATTATGAATCAGCACTTGAGCACCTTGTCCTGGCCAGCGTATCGATGATCGCCAATGGACAAGACAGTGAAGTTGCAGCTATTGACATTAGCATTGGCGATATTTACTTGTCACTCTGTCGTTTTGACGAGGCTGTCTTTGCCTATCAGAAAGCTCTTACCGTGTTCAAATCCACCAGAAGCGAGAACCATGGTTCTGTGGCATTAGTATACATTCGCCTCGCTGACCTTTACTACAAGACAGGAAAACTAAGAGAGTCAAAATCCTACTGTGAAAATGCCTTGAGAATATACAGCAAACCTGTTCCTGGAACTACCCCTGAAGAGATTGCCAGTGGGTTAACTGAAATCTCTGCCATCTATGATGGTCTCAATGAGCCTGAAGAGGCACTGAAGCTCTTGCAGAAGGCAATGAAGTTATTAGAGGATAACCCCGGACAGTATAGGACGATCGCAGGAATTGAAGCACAAGTGGCCGTGATGTTCTACACGGTAGGGAGGTTCAAGGAGGCTCAGGACTGTTTTCAAAGTGCCATCACTAAGCTGAGGGCTAGTGGGGAGAGGAACTCTGCCTTTTTTGGCGTCTTGTTGAACCAAATGGGGCTGGCTTGTGTGCAACTGTACAAAATAGAAGAAGCAGCCAAACTTTTTGAAGAGGCAAGAGAGATACTAGAGAAGGAGTGTGGGACATATCATTTGGACACTCTAGGAGTGTATAGCAACCTTGCAGCAACTTATGATGCCATGGGAAGGGTTGATGATGCAATTGAGATATTGGAGCAGATACTGAAGATGAGAGAAGAAAAGCTTGGAACGGCAAATCCAGATGTTGATGATGAAAAGAAAAGACTATATGAGCTCTTGAAAGAAGCAGGAAGGGTTCGGAATAAAAAGGGAAAATCCCTTGAAAATCTGATAGATTCCAACTTTCTAAAGATGAAGAAGGAAGGAAGGAAGCGAAGGACTGCATTTGGTTTGAGAACTTAA 1716 0.4866 MPGLVAVKTPPQTMPFGVSATGYSNGGEQRPSSPIVKRSLKKSQENLIADDSSVDNPDLGPFLLKLARDAIASGENPNKALDLAIRASKSFEQCSGPGLELAMCLHVVAAIYSSLGRFGEAIHEMERSIEFPDPGKGSDHAMAKFSGYMQLGDTYSMIGQLQRSIKCYSSGLQIQMEALGKSDPRVAETCRYLAEAHVQAMQFDEAENFCKKALEIHWEHSSPASLPEAADRRLMALICDAKGDYESALEHLVLASVSMIANGQDSEVAAIDISIGDIYLSLCRFDEAVFAYQKALTVFKSTRSENHGSVALVYIRLADLYYKTGKLRESKSYCENALRIYSKPVPGTTPEEIASGLTEISAIYDGLNEPEEALKLLQKAMKLLEDNPGQYRTIAGIEAQVAVMFYTVGRFKEAQDCFQSAITKLRASGERNSAFFGVLLNQMGLACVQLYKIEEAAKLFEEAREILEKECGTYHLDTLGVYSNLAATYDAMGRVDDAIEILEQILKMREEKLGTANPDVDDEKKRLYELLKEAGRVRNKKGKSLENLIDSNFLKMKKEGRKRRTAFGLRT 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g2112 571 ProSiteProfiles TPR repeat profile. 269 302 IPR019734 GO:0005515
Alju05g2112 571 Pfam MalT-like TPR region 111 253 IPR041617 -
Alju05g2112 571 Pfam Tetratricopeptide repeat 268 342 - -
Alju05g2112 571 Pfam Tetratricopeptide repeat 439 511 - -
Alju05g2112 571 Coils Coil 367 387 - -
Alju05g2112 571 Coils Coil 450 470 - -
Alju05g2112 571 SUPERFAMILY TPR-like 89 175 IPR011990 GO:0005515
Alju05g2112 571 Gene3D Tetratricopeptide repeat domain 256 436 IPR011990 GO:0005515
Alju05g2112 571 Gene3D Tetratricopeptide repeat domain 438 559 IPR011990 GO:0005515
Alju05g2112 571 SUPERFAMILY HCP-like 234 341 - -
Alju05g2112 571 SMART tpr_5 311 344 IPR019734 GO:0005515
Alju05g2112 571 SMART tpr_5 395 428 IPR019734 GO:0005515
Alju05g2112 571 SMART tpr_5 269 302 IPR019734 GO:0005515
Alju05g2112 571 SMART tpr_5 354 387 IPR019734 GO:0005515
Alju05g2112 571 SMART tpr_5 437 470 IPR019734 GO:0005515
Alju05g2112 571 SMART tpr_5 479 512 IPR019734 GO:0005515
Alju05g2112 571 SMART tpr_5 145 178 IPR019734 GO:0005515
Alju05g2112 571 SMART tpr_5 187 220 IPR019734 GO:0005515
Alju05g2112 571 ProSiteProfiles TPR repeat profile. 479 512 IPR019734 GO:0005515
Alju05g2112 571 Gene3D Tetratricopeptide repeat domain 51 255 IPR011990 GO:0005515
Alju05g2112 571 MobiDBLite consensus disorder prediction 16 35 - -
Alju05g2112 571 ProSiteProfiles TPR repeat profile. 354 387 IPR019734 GO:0005515
Alju05g2112 571 SUPERFAMILY TPR-like 151 509 IPR011990 GO:0005515
Alju05g2112 571 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 38 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g2112 Alju-ChrAlju05 54455081 54458376 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju05g2112 05 54455081 54458376 Alju05g2112 05 54455081 54458376 ECH