Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g2027 ATGGCGGAGAAATCATGTGTCAAGCGCCTGCAAAAGGAATTTAGAGCTCTTTGTAAAGAGCCAGTGCCCCATATTGTTGCTCGTCCATCACCTAATGATATACTTGAGTGGCATTATGTGTTGGAAGGAAGTGAAGGAACACCTTTTGGAGGTGGATATTATTATGGAAAAATCAAGTTTCCTCCTGAATATCCATATAAACCTCCTGGAATCAGCATGACTACACCTAATGGACGCTTCATTACACAGAAAAAGATCTGCTTGTCCATGAGTGATTTTCATCCAGAAAGTTGGAATCCTATGTGGTCCGTATCAAGCATACTTACGGGTCTTCTATCCTTCATGGTGGACACCAGTCCAACGACTGGCAGTGTGAGCACTACTACCGAAGAGAAGCAACGTTTAGCAAAATCTTCCCTTGCTTTCAATTGCAAGAATGCAACATTCAGGAAAATGTTCCCCGAGTATGTTGATAAGTACAACCAGCGGCTTTCCGAGCAAGCTGCCTCTGAACAAATGGCATCTGAGGTGGCATCTCGTGAGAAGAGTTCAAGGCCCATGTTGAGAAAAGTTTCAGGGTCTACAGGAGAAGACATGAAAGTAGCAGCAGAGGAATTGAAAGAGGTGAGGAAAAAACAAAAGCAATCTTTACCCACATGGATGATGTTGTTGCTCTTCTCCATTTTTGGGCTTATAATGGCATTGCCTCTGCTGCAGCTGTGA 723 0.4357 MAEKSCVKRLQKEFRALCKEPVPHIVARPSPNDILEWHYVLEGSEGTPFGGGYYYGKIKFPPEYPYKPPGISMTTPNGRFITQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMVDTSPTTGSVSTTTEEKQRLAKSSLAFNCKNATFRKMFPEYVDKYNQRLSEQAASEQMASEVASREKSSRPMLRKVSGSTGEDMKVAAEELKEVRKKQKQSLPTWMMLLLFSIFGLIMALPLLQL 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g2027 240 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 6 164 - -
Alju05g2027 240 Gene3D Ubiquitin Conjugating Enzyme 1 179 IPR016135 -
Alju05g2027 240 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 5 162 IPR000608 -
Alju05g2027 240 FunFam Ubiquitin-conjugating enzyme E2 34 1 177 - -
Alju05g2027 240 MobiDBLite consensus disorder prediction 171 196 - -
Alju05g2027 240 Pfam Ubiquitin-conjugating enzyme 9 124 IPR000608 -
Alju05g2027 240 CDD UBCc 7 157 IPR000608 -
Alju05g2027 240 SMART ubc_7 8 162 - -
Alju05g2027 240 SUPERFAMILY UBC-like 5 156 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g2027 Alju-ChrAlju05 53024467 53026463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g2027 1 240 Miscellaneous Gene Families AT1G17280 71.784 2.05e-130 366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju05g2027 05 53024467 53026463 Alju05g2027 05 53024467 53026463 ECH