Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1735 ATGAGTAACTCTGGGGGTGTGATGGCTTTGTCGCAACCTTCTCAGTCGGCGGCTAAGCAATGTGGTGTGACGAAGCCGATAACAATGGCTGGGCCGACTGCGGCTGATTTACAGAGGACTTTGGAGTTAGAGAAGTGTCTGGTTCATTCAGGGCTGTATGAGAGCGAAGAGGAGGCTGCTAAGAGAGAGGAGGTCCTTCTTCGACTTGGACAGATAGTAAAGGAGTGGGTGAAGCAACTGACTGGGCTAAGAGGATACACTGATCAAATGGTGGAAGATGCTAATGCTGTCATATTCACATTTGGTTCTTATCGACTTGGGGTTCACGGTCCTGGGGCGGACATAGACACATTATGTATTGGGCCATCCTATGTGAACCGAGAGGAGGACTTCTTCTTTGTGTTGCATGACATTCTGGCTAACATGGATGAGGTTTCTGAACTGCAACCGGTTCCAGATGCTCATGTACCGGTTATGAAATTCAAGTTTGATGGAATATCAATTGACCTACTTTATGCCAGTATATCTTGCTTGGTTGTGCCAGAAAACTTGGACATATCGGATGTTTCTGTCTTATACAATGTGGATGAGCCTACTGTTCGAAGTCTGAATGGATGTCGTGTTGCAGATCAAATTTTAAAGCTTGTTCCAAATGTTGAGCACTTTCGAACAACACTTCGGTGCTTAAAATTTTGGGCCAAAAGACGAGGTGTTTATTCCAATGTGACTGGATTTCTTGGGGGTGTGAACTGGGCCATTCTTGTTGCTCGGGTGTGCCAGCTCTATCCAAATGCAGTTCCAAGTATGCTTGTCTCTCGATTCTTTCGGGTGTATACTCAGTGGCGTTGGCCAAATCCTGTCATGTTGTGTCCAATTGAGGAGAATGAGCTTGGATTTTCTGTTTGGGATCCTCGTAAAAATCCTCGTGATCGAACACATCATATGCCCATCATTACTCCTGCTTATCCCTGTATGAATTCTAGTTACAATGTTTCAATAAGTACACTTCGTGTTATGATGGAACAGTTTCATTATGGCAATAAGATATGTGAGGAAATAGATCTGAGTAAAGCTGCTTGGAGTCGTATGTTTGAGCCATACCTTTTCTTTGAGAGTTATAAAAACTATCTGCAAGTTGACATAGTAGCGGCTGATGCTGATGACTTGCGGACATGGAAGGGTTGGGTGGAATCTCGACTTCGGCAGCTGACTTTGATGATTGAGCGTGACACCCTTGGAAAGTTGCAGTGTCATCCTTATCCTCATGATTATGTGGATGCTTCTAAACAATGTGCACATTGTGCTTTCTTCATGGGCCTGCAGAGGAAGCAAGGGGAGACTGTTCAAGAAGGTCAACAGTTTGATATACGTGAGACAGTTGATGAATTCCGGCATTCTGTTAATATGTACATGTTCTGGAAACCTGGGATGAAAATACATGTTTCTCACGTTCGTAGAAGGCAAATTCCATCTTATGTTTTACCTAATGGTTATAATAAGAGACCTCGACCATCAAAGCCAACTGCACAAGAAGAGGAACCTGTTAAATCATTTCATGTAACTGAGGTTTATGGGAGTGAACATGTTGATGGAAACCGTAAGAGGAAAAATGAGGACATGGTGGGTGAGAAGCATGATATTATTGCAAAAAGGCTTTCTAGTAGTCCTGAGAGTCATGATCCAATTTCTTCAAACATATTGGATAAATCGGTGGATATCTTAAGCAGCAGTACAAGAAACGGAATGTGCCTGCTTGAAGTGAAGAGAGTTCAAGTTCTGGCTTCCAATGGTTTTTCTGCTGATGCTAGAGAGTTGAGACCTGTGGAGAGCGTTGAATTGTCCTACCGAGGGCAAAATGATTTGGATAAAGGAATGACATCTCCTGAACATGAACCTGAATGTGCATCAAATTCTAGTGTAATTACATCTGCTACAAGTGATGGTGGTTCTTCAGATGATACTGGGATTGAATCAGTGGCAGACTGTGCTGAGGATAACATGGGAGGAGTTGAAGGGACTGTTAGAGAGGGTGACGAGATGGCCTCTTTACAGGATGCTGCATGTGAGGGAGACTCTGTTGCACGTTTGGAGAATGCAATTACTAGTGAAAAAGGATTAATGCGTGATGAGCTTTGGAACAATACGAGTAGGTAA 2154 0.4336 MSNSGGVMALSQPSQSAAKQCGVTKPITMAGPTAADLQRTLELEKCLVHSGLYESEEEAAKREEVLLRLGQIVKEWVKQLTGLRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCIGPSYVNREEDFFFVLHDILANMDEVSELQPVPDAHVPVMKFKFDGISIDLLYASISCLVVPENLDISDVSVLYNVDEPTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWAILVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCPIEENELGFSVWDPRKNPRDRTHHMPIITPAYPCMNSSYNVSISTLRVMMEQFHYGNKICEEIDLSKAAWSRMFEPYLFFESYKNYLQVDIVAADADDLRTWKGWVESRLRQLTLMIERDTLGKLQCHPYPHDYVDASKQCAHCAFFMGLQRKQGETVQEGQQFDIRETVDEFRHSVNMYMFWKPGMKIHVSHVRRRQIPSYVLPNGYNKRPRPSKPTAQEEEPVKSFHVTEVYGSEHVDGNRKRKNEDMVGEKHDIIAKRLSSSPESHDPISSNILDKSVDILSSSTRNGMCLLEVKRVQVLASNGFSADARELRPVESVELSYRGQNDLDKGMTSPEHEPECASNSSVITSATSDGGSSDDTGIESVADCAEDNMGGVEGTVREGDEMASLQDAACEGDSVARLENAITSEKGLMRDELWNNTSR 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1735 717 Gene3D - 22 364 - -
Alju05g1735 717 MobiDBLite consensus disorder prediction 493 515 - -
Alju05g1735 717 PANTHER POLY A POLYMERASE 13 537 - -
Alju05g1735 717 SUPERFAMILY PAP/Archaeal CCA-adding enzyme, C-terminal domain 369 494 IPR011068 GO:0003723|GO:0016779|GO:0031123
Alju05g1735 717 MobiDBLite consensus disorder prediction 618 638 - -
Alju05g1735 717 Gene3D Beta Polymerase, domain 2 54 210 IPR043519 -
Alju05g1735 717 Pfam Poly(A) polymerase predicted RNA binding domain 369 426 IPR007010 GO:0003723|GO:0043631
Alju05g1735 717 FunFam Putative poly(A) polymerase gamma 196 364 - -
Alju05g1735 717 SUPERFAMILY PAP/OAS1 substrate-binding domain 217 366 - -
Alju05g1735 717 FunFam Poly(A) polymerase alpha, putative 54 210 - -
Alju05g1735 717 Gene3D Poly(A) polymerase predicted RNA binding domain 369 484 - -
Alju05g1735 717 CDD NT_PAP_TUTase 61 216 - -
Alju05g1735 717 SUPERFAMILY Nucleotidyltransferase 22 215 IPR043519 -
Alju05g1735 717 FunFam Nuclear poly(A) polymerase 4 368 484 - -
Alju05g1735 717 Pfam Poly(A) polymerase central domain 22 366 IPR007012 GO:0043631|GO:1990817
Alju05g1735 717 Pfam Nucleotidyltransferase domain 95 171 IPR002934 GO:0016779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1735 Alju-ChrAlju05 48702589 48707235 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju05g1735 05 48702589 48707235 Alju05g1735 05 48702589 48707235 ECH