Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1723 ATGGACAGAAACCAATCTCCCAGGCAGCTTGCAGCCATGAAACAATCCCTCTTTGATCAGGGATATCTGGATGAGCAATTCATCCAACTAGAGGAACTTCAAGATGATACCAACCCTAACTTTGCAGAAGAGATTGCGACTCTTTACTTCCGTGATTCTTCCCGATTCATTTCCAATCTAGACCAAGCAATGGAAAGGAAGCCGCTGGATTTTGGCAAACTTGATAGCATTATGCATCAGTTCAAAGGAAGCAGCTCCAGTATTGGAGCTCAAAAGGTGAAAGCAGAGTGTACTCTGTTTAGGGAATATTGCGCAGCAGAAAATGCTGAAGGATGCATGAGGAGTTTCCAACAACTGAAGAAAGAGCATGCTGTACTGAGAAAGAAACTTGAAACTTATTTTCAGAGTTTGTGTTTGAAGCTTGAATGGCAAATGCTGTGGGATATTATTATTCCTGCATTTGATAGTGGAAGGATATGA 480 0.4167 MDRNQSPRQLAAMKQSLFDQGYLDEQFIQLEELQDDTNPNFAEEIATLYFRDSSRFISNLDQAMERKPLDFGKLDSIMHQFKGSSSSIGAQKVKAECTLFREYCAAENAEGCMRSFQQLKKEHAVLRKKLETYFQSLCLKLEWQMLWDIIIPAFDSGRI 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1723 159 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 7 135 IPR036641 GO:0000160
Alju05g1723 159 Pfam Hpt domain 45 126 IPR008207 GO:0000160
Alju05g1723 159 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 38 133 IPR008207 GO:0000160
Alju05g1723 159 Gene3D HPT domain 1 141 IPR036641 GO:0000160
Alju05g1723 159 PANTHER PHOSPHORELAY INTERMEDIATE PROTEIN YPD1 7 135 IPR045871 GO:0000160|GO:0009927|GO:0043424
Alju05g1723 159 FunFam Histidine-containing phosphotransfer protein 4 1 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1723 Alju-ChrAlju05 48589626 48591319 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju11g0694 11 8255250 8260686 Alju05g1723 05 48589626 48591319 CCT
Alju05g1723 05 48589626 48591319 Alju11g0694 11 8255250 8260686 ECH
Alju05g1723 05 48589626 48591319 Alju05g1723 05 48589626 48591319 ECH