Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1722 ATGATCTCATCTAATAGATGCAGCTTCCTGAGCAACACAGGGTTAGTTGGGTGTTCCAGATCCTCTGGTTTACAGAGGAGGCGTTTAGTTCCTTTCAGGGTGGATTGCTTGGCTTCTAGCAGTAGTTCAGGTGGTGACAGAAAACTCAGAGCTGTGATGGAAACTATAGCTGACGTGGACAATAATCAAACGGTAGCAGGCGGCGTTCGGGATGTTTATGGCGAGGATAAGGCCACAGAAGATCATTTTGTTACTCCATGGAGTGTTTCTGTTGCTAGTGGGTATACCTTGTTGCGAGATCCACACTTCAACAAAGGGCTTGCCTTCACCGATAAAGAAAGGGACGCCCACTTCTTGCGAGGTCTTCTTCCCCCGACAAGTATTTCACAAGAAACTCAGGTGAAGAAAGTGCTCCAGCATATACGTCAGTATCAACTTCCATTACAGAAATACATGGCAATGATGAATCTTCAGGAGACAAATGAAAGGGTGTTTTACAAGCTTCTTATTGATCATGTTGAGGAGTTACTCCCAGTTGTCTACACTCCAACTGTTGGAGAAGCTTGCCAGAAATATGGGAGCATCTATATGCGTCCCCAGGGTCTTTATATAAGTTTGAAGGAAAAGGGGAGGATTCTTGAAGTGCTAAAAAATTGGCCTGAGAAGGACATTCAGGTTATTGTTGTAACCGATGGAGAACGGATCCTTGGTCTTGGTGATCTTGGCTGTCAGGGGATGGGAATACCAGTGGGGAAACTTTCTTTATATACTGCACTTGGAGGAGTTCGCCCTTCTGCTTGCTTACCGATAACCATTGATGTTGGTACGAACAATGAGACACTGTTGAATGATGAACTATATATAGGGCTCAGGCAAAGACGAGCAACCGGGCAGGAATATTCCGAACTTATCCATGAATTTATGACAGCAGTCAAGCAAAATTATGGGGAAAAAATCCTTATTCAGTTTGAAGACTTTGCAAACCACAATGCTTTTGATCTACTTGAAAAATATAGATCGACACATCTTGTTTTCAATGACGATATTCAGGGAACAGCATCGGTAGTCCTCGCTGGACTCATTGCAGGTCTGAAATTTATTGGAGGAAATTTATCTGATCATAGATTCTTATTCCTTGGAGCTGGAGAGGCTGGCACTGGAATAGCAGAGCTCATAGCACTTGAAACTTCAAAACAGACAGGGGCGCCAGTGGAAGAAGTGCGCAAGAACATTTGGTTGGTGGACTCAAAGGGATTGATCGTTAGCTCCCGTGGAGAATCACTTCAACACTTTAAGAAGCCCTGGGCTCATGAACATGAACCCATCACAAATCTTTTAGATGCTGTTAAAAAAATTAAGCCAACAGTGTTGATTGGAACATCGGGTCAAGGCAAAACTTTTACTCAAGAGGTGGTTGAGGCTATGGCTGAAATTAACAAGAGACCTATCATTCTTGCCCTTTCCAACCCAACATCACAGGCAGAATGTACTGCTGAAGAAGCTTATACATGGAGCAAGGGACGCGCCATTTTTGCTAGTGGGAGCCCGTTTGCCCCAGTTGAATATGAGGGGAATGTCTTTGTGCCTGGCCAGGCCAATAATGCATACATCTTTCCTGGATTTGGTCTAGGCTTAATAATGTCTGGGACCATTCGAGTACACGATGACTTGCTTTTGGCTGCCTCGGAGGCTTTGGCTTCACAAGTGACACAGGAGCACTTTGACAAGGGACTCATATACCCACCATTCAAAGATATCAGAAAGATTTCAGCTCATATTGCTGCCAAAGTGGCTGCCAAATCATATGAGCTTGGGTTGGCCACTCGTCTTCCTCAACCAAAAGATTTGGTTAAATATGCTGAGAGCTGCATGTATACTCCAGCCTACAGAAGATATCGGTGA 1902 0.4427 MISSNRCSFLSNTGLVGCSRSSGLQRRRLVPFRVDCLASSSSSGGDRKLRAVMETIADVDNNQTVAGGVRDVYGEDKATEDHFVTPWSVSVASGYTLLRDPHFNKGLAFTDKERDAHFLRGLLPPTSISQETQVKKVLQHIRQYQLPLQKYMAMMNLQETNERVFYKLLIDHVEELLPVVYTPTVGEACQKYGSIYMRPQGLYISLKEKGRILEVLKNWPEKDIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSACLPITIDVGTNNETLLNDELYIGLRQRRATGQEYSELIHEFMTAVKQNYGEKILIQFEDFANHNAFDLLEKYRSTHLVFNDDIQGTASVVLAGLIAGLKFIGGNLSDHRFLFLGAGEAGTGIAELIALETSKQTGAPVEEVRKNIWLVDSKGLIVSSRGESLQHFKKPWAHEHEPITNLLDAVKKIKPTVLIGTSGQGKTFTQEVVEAMAEINKRPIILALSNPTSQAECTAEEAYTWSKGRAIFASGSPFAPVEYEGNVFVPGQANNAYIFPGFGLGLIMSGTIRVHDDLLLAASEALASQVTQEHFDKGLIYPPFKDIRKISAHIAAKVAAKSYELGLATRLPQPKDLVKYAESCMYTPAYRRYR 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1722 633 CDD NAD_bind_1_malic_enz 349 627 - -
Alju05g1722 633 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 349 632 IPR036291 -
Alju05g1722 633 FunFam Malic enzyme 92 346 - -
Alju05g1722 633 SMART malic_2 158 339 IPR012301 GO:0004471
Alju05g1722 633 Gene3D - 92 346 IPR037062 GO:0004471
Alju05g1722 633 PRINTS Malic enzyme signature 164 188 IPR001891 GO:0004470|GO:0004471
Alju05g1722 633 PRINTS Malic enzyme signature 320 338 IPR001891 GO:0004470|GO:0004471
Alju05g1722 633 PRINTS Malic enzyme signature 376 392 IPR001891 GO:0004470|GO:0004471
Alju05g1722 633 PRINTS Malic enzyme signature 345 361 IPR001891 GO:0004470|GO:0004471
Alju05g1722 633 PRINTS Malic enzyme signature 224 253 IPR001891 GO:0004470|GO:0004471
Alju05g1722 633 PRINTS Malic enzyme signature 479 495 IPR001891 GO:0004470|GO:0004471
Alju05g1722 633 PRINTS Malic enzyme signature 260 282 IPR001891 GO:0004470|GO:0004471
Alju05g1722 633 PIRSF ME 55 633 IPR001891 GO:0004470|GO:0004471
Alju05g1722 633 ProSitePatterns Malic enzymes signature. 345 361 IPR015884 GO:0004471
Alju05g1722 633 PANTHER MALIC ENZYME-RELATED 61 632 - -
Alju05g1722 633 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Alju05g1722 633 Pfam Malic enzyme, N-terminal domain 158 339 IPR012301 GO:0004471
Alju05g1722 633 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 70 348 IPR046346 -
Alju05g1722 633 SMART Malic_M_2 349 602 IPR012302 GO:0051287
Alju05g1722 633 FunFam Malic enzyme 347 633 - -
Alju05g1722 633 Pfam Malic enzyme, NAD binding domain 349 600 IPR012302 GO:0051287
Alju05g1722 633 Gene3D - 347 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1722 Alju-ChrAlju05 48578209 48584286 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju11g0698 11 8309292 8315752 Alju05g1722 05 48578209 48584286 CCT
Alju05g1722 05 48578209 48584286 Alju05g1722 05 48578209 48584286 ECH
Alju05g1722 05 48578209 48584286 Alju11g0698 11 8309292 8315752 ECH