Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1668 ATGGCTTCTCTGGCAACCGTAGCTTCTGTTCAGCCAGCAACAGTCAAGGGCCTCGCCGGAAGTTCACTCACTGGAACTAAACTCTCCGTCAGGCCCTGCCGCCTCAATCTCAGACCCAAAAAATTAAAGTGCCTCTCATTTGTCCTCTTTCGTCTTAAATTGCAAAGTTTTGTGATTATGAGTGGGATTTATATGGCTCTGATGCACCCTCACCTTATAACTCTTCAGAGCAAGTTCTTTGAGACATTTGCTGCTCCATTCACAAAGAGAGGATTTCTCCTCAAATTCTTGATACTAGGAGGTGGTGCCACCCTCGCTTACTTCAGTGCCACAGCTTCAGGAGACATTCTACCCATTGTTAAGGGCCCACAACTGCCTCCAAATCCCCGTCCACGTGGCAAGATCTAG 408 0.4779 MASLATVASVQPATVKGLAGSSLTGTKLSVRPCRLNLRPKKLKCLSFVLFRLKLQSFVIMSGIYMALMHPHLITLQSKFFETFAAPFTKRGFLLKFLILGGGATLAYFSATASGDILPIVKGPQLPPNPRPRGKI 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1668 135 Gene3D - 89 111 - -
Alju05g1668 135 NCBIfam SipW-dependent-type signal peptide 97 113 IPR023833 -
Alju05g1668 135 Pfam Photosystem I reaction centre subunit VI 74 135 IPR004928 GO:0009522|GO:0009538|GO:0015979
Alju05g1668 135 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT VI-2, CHLOROPLASTIC 74 135 IPR004928 GO:0009522|GO:0009538|GO:0015979
Alju05g1668 135 FunFam Photosystem I reaction center subunit VI 89 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1668 Alju-ChrAlju05 47883955 47885003 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju05g1668 05 47883955 47885003 Alju05g1668 05 47883955 47885003 ECH