Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1644 ATGGATGTCAGTGAAGGAATTAAACGTGACTCGAAATTCCCCGCCTTTCCCTTTAAACCCTACTCCATCCAGATCGACTTCATGAACGCCCTCTATCAGTCTCTCGACCAAGGTGGCGTTTCCATGCTCGAAAGTCCCACTGGTACTGGGAAGACTATGAGTGTTATTTGTAGCGCTTTGCAATGGGTGCTTGATCGGAGGCAACAGCAGAAATCAGAAGAAGCAGGGCGAGATTGTGGTAAAAATCAGGAAAATCATGGCGGGGGTTCAGATGACGAACCTGATTGGCTGAGAGGCTTTGTTGTGGACCAAGAAAAGCAAGTTCAGTCTGAAAGAACAAGCAAGAAGAAGTACGGGTCTAGATTAGGTAAGCCTGATAAGAAGCATAACCGTGAAGGTTCTCCTCCTGAAAAGGGGTGTGATAATTCGCATAAGAAAATTGATAAAGTGGATGTGGATGTTACTGATGAGGAATTCTTACTTGAGGAATATGAAAGTGAAGATGAAGAAGATCTGGATAATGTAACTTCAAAGAGGAAGGCTTCTAAAAGTGGTTTTACTTCGTCCAGTGAAGAGGATGAATCTGAGGAGGAGGAGGAGGTTGAAAAGAAGTTAAAGGTTTTCTTCTGTAGTCGAACTCATTCACAGCTATCACAGTTCATAAAGGAATTAAGGAAAACGGTCTTTGCTGATGAGATGGACGTTGTTTGTTTAGGCTCTAGGAAAAATCTTTGCATTAACGAAGAAGTACTAAAACTTGGTAACTCCACACGCATAAATGAGCGATGCTTGGAACTCCAGAAAAAAAAGAAAAATGAACCAGCAAAAGTTAAGAACTTAAGAGCATGTACAGGAGTACGGAGAACAAAGGCATTGTCTGGTTGCCCAATGCTTAGAAAGCATAGACTACAAAAAGAATTCAGGGAGGTATCTCAGGGAGGGGCCTTGGACATTGAAGATCTTGCTAACTTGGGGAGAAATTTGGGAACTTGTCCTTATTATGGTTCTAGAAGCATGGTTTTGAACGCTGATCTTGTGGTTCTACCATATCAGTCTCTTCTGTCAAAATCATCTCGTGAAGCACTTGGTTTGAATTTGAAATCCAATGTTGTCATTATAGATGAAGCTCACAATTTAGCAGATTCACTCATTAGTATGCATGACTCCAGAATTACTTTAGCACAGCTGGAAAATGTGCATTCCCATTTGGAGAGATACTTTGACAGATTCTGTAATCTTCTGGGACCTGGTAACCGGAGATATATTCAAACTATAATGGTCCTCACTCGAGCTTTCCTGAGAGTGCTAAACAATGAGAAGGGTGCAAATCTCATAAATTCTTGCCAAGATATAGAAACGGCTTTTCAGGAAAGTGGAGCCTCTGAATTTACCATGTCCGTCAATGATTTCATCTTTGAACTAAATGTAGACAATGTCAACTTGATTAAGCTGGTGAAGTATATCAAGGAAAGCAAAATCATGCACAAGGTTTCCAGTTACGGAGAAAAGGTAGCCAACTTGGAGAAGATTTCAGTTATCACTAAACTTGGAGAACATTATGACGATGGAAGCACTCAGTCAGCGTTCCAGTCATTAGCTGAAATGTTGCTATCACTGACAAACAATGACAATGATGGAAGGATAATCATTTCCAAGTCTAAGACAACGGGCCCCAGGAAACAAGGAGGGTATATTAAATATGTTATGCTCAGTGGAGAGAAGATATTTTCTGAGATTGTGGACCAAGCACACGCTGTCCTATTAGTAGGGGGAACTCTACAACCTATTGAAGAAACACGAGAGCGACTCTTTCCGTGGTTACCACAAAACCATTTGCATTTCTTTTCATGCGGTCATATTGTCCCTCCACAGAGTATTACGCCAATTGCAGTTTCCCGTGGCCCTTCTGGCCGCTCCTTTGATTTTAGCTACAGCTCAAGGAGCTCACCTGATACTATACGGGAGCTAGGCCTTCTCCTCTGTAATTTGGTAACCATAGTTCCTGAAGGAATTGTTGTTTTCTTCTCATCTTTTGATTATGAAGCGAAAGTCTATGAAGCCTGGGAATCTTCTGGCATTCTGGATAGAATTACAAAGAGGAAGAGTATATTTAGAGAGCCTAGAAATAATACAGATATTGAATCTATTCTTAAAGAATATAAAGAAACAGTTTGCCCATCATCGAGTATAAATTCAAACGGAAACCCAGCATCGCCGGGCGGTGCGGTCCTCCTAGCTGTTGTTGGTGGAAAGATATCTGAAGGGATTAACTTAAGTGATGGGATGGGGCGGTGCATAATCATGGTTGGACTGCCATATCCTAGTCCATCTGACATTGAGTTGCTGGAGAGGATAAAGCACATTGAAGGTTTTCGAAATTCAAACCCCACTGAAACTCCTACTACATTTTCCACCAGTTATAATGTTTATAGTGGAGATATACAAGGTGGTTTTGATATCTTAAGAAGTTGCAGTCACAGAGGAAAGGAATATTATGAGAATCTCTGCATGAAAGCTGTAAATCAATCAATAGGTAGAGCAATCCGTCACATTAATGACTATGCAGCAATTTTGTTGGTTGACACGAGGTATGCATCTGATTCCTCAAAGAGGAGTTTTTCTCATCCAGTCAACAAGCTCCCACAATGGATTAAGGATCGTTTGGTTTCGTCTACCAATAACTATGGTGAAGTCCATAGGTTACTGCATCAGTTTTTCAAGTTGAACGGAAGGGTTTGTCAATAA 2745 0.4106 MDVSEGIKRDSKFPAFPFKPYSIQIDFMNALYQSLDQGGVSMLESPTGTGKTMSVICSALQWVLDRRQQQKSEEAGRDCGKNQENHGGGSDDEPDWLRGFVVDQEKQVQSERTSKKKYGSRLGKPDKKHNREGSPPEKGCDNSHKKIDKVDVDVTDEEFLLEEYESEDEEDLDNVTSKRKASKSGFTSSSEEDESEEEEEVEKKLKVFFCSRTHSQLSQFIKELRKTVFADEMDVVCLGSRKNLCINEEVLKLGNSTRINERCLELQKKKKNEPAKVKNLRACTGVRRTKALSGCPMLRKHRLQKEFREVSQGGALDIEDLANLGRNLGTCPYYGSRSMVLNADLVVLPYQSLLSKSSREALGLNLKSNVVIIDEAHNLADSLISMHDSRITLAQLENVHSHLERYFDRFCNLLGPGNRRYIQTIMVLTRAFLRVLNNEKGANLINSCQDIETAFQESGASEFTMSVNDFIFELNVDNVNLIKLVKYIKESKIMHKVSSYGEKVANLEKISVITKLGEHYDDGSTQSAFQSLAEMLLSLTNNDNDGRIIISKSKTTGPRKQGGYIKYVMLSGEKIFSEIVDQAHAVLLVGGTLQPIEETRERLFPWLPQNHLHFFSCGHIVPPQSITPIAVSRGPSGRSFDFSYSSRSSPDTIRELGLLLCNLVTIVPEGIVVFFSSFDYEAKVYEAWESSGILDRITKRKSIFREPRNNTDIESILKEYKETVCPSSSINSNGNPASPGGAVLLAVVGGKISEGINLSDGMGRCIIMVGLPYPSPSDIELLERIKHIEGFRNSNPTETPTTFSTSYNVYSGDIQGGFDILRSCSHRGKEYYENLCMKAVNQSIGRAIRHINDYAAILLVDTRYASDSSKRSFSHPVNKLPQWIKDRLVSSTNNYGEVHRLLHQFFKLNGRVCQ 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1644 914 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 391 IPR027417 -
Alju05g1644 914 PANTHER DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER 13 907 IPR045028 -
Alju05g1644 914 Pfam Helicase C-terminal domain 660 877 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Alju05g1644 914 SMART deadxpd 12 418 IPR006554 GO:0003678|GO:0016818
Alju05g1644 914 FunFam RAD3-like DNA-binding helicase protein 17 78 - -
Alju05g1644 914 MobiDBLite consensus disorder prediction 68 100 - -
Alju05g1644 914 MobiDBLite consensus disorder prediction 163 198 - -
Alju05g1644 914 MobiDBLite consensus disorder prediction 68 147 - -
Alju05g1644 914 CDD SF2_C_XPD 625 864 - -
Alju05g1644 914 SMART ultradead3 16 424 IPR014001 -
Alju05g1644 914 NCBIfam DNA repair helicase (rad3) 167 895 IPR013020 GO:0003678
Alju05g1644 914 SMART Cxpdneu3 678 866 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Alju05g1644 914 MobiDBLite consensus disorder prediction 108 147 - -
Alju05g1644 914 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-2 domain profile. 10 425 IPR014013 GO:0005524
Alju05g1644 914 Pfam DEAD_2 209 396 IPR010614 GO:0003677|GO:0003678|GO:0005524
Alju05g1644 914 Gene3D - 186 424 IPR027417 -
Alju05g1644 914 Gene3D - 17 73 IPR027417 -
Alju05g1644 914 Gene3D - 638 879 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1644 Alju-ChrAlju05 47497825 47502514 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju05g1644 05 47497825 47502514 Alju05g1644 05 47497825 47502514 ECH