Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1626 ATGTGCGCGCGCAAATCATCTGAGGTTCATTCCGGTGCGAAAGAGACCTTGCAGGGTCTCTTGCGTGCCATCTCTCTCTCTCTCAAGCTTGTTCTTCGTCTTCTCTCTCTACTGAATCTCCATTTTCTGGCCTTTGCATATTCTCTTCCGTTTCCTGTTGATTATTCTCTGGTTACCAACATGCTTGACAAATTCTTGAAGCCGAAATTCTATAGAAAATGGTACAGCACTGACCTAGAGATAATCAAAACGTACCTGGATTGCACAAAGTCGCGGCTAGAGGCGATACGGAACAAGAGAAACGCAGTGCTGAAGTTTCTGAAGAAAGATATCGCCGATCTTCTCAAGAATGGCCTTGACGACAGGGCATATGGACGAGCTGAAGGGTTCTTGGTCGAGGAAAACACGTCAGCTTGTTACGAACTCGTTGTAAAGTTTATTGGGTGCGTATCAGATCATCTTCAAGTCCTTTCTAAGGAGAGTAATTGTCCTGATGAATGCAAGGAGGCTATACCGTCATTGATATATGCTGCTGCAAGATTTGCTGATCTGCCTGAATTGCGGGACCTCAGAACTCTGTTCAAAGAGAAGTTTGGGGATTCTCTTGAACCTTGTACAAGTAAAGAGTTTTTGGAGAAGTCGAGGCCACAACCTACCAAAGAAATGAAGATTCAGATATTAAAAAAAATAGCACAAGAATTCTCAATAAAGTGGAATAGCAGGGCTATGGAGGAGAAACTCAATATGTCCTATTCATCACGTCAAGAGAGGCCTAGGATGACATCACTGAACTCGAATTATATCGTTAATAATGAAGAAACATTGAGGCTTCAGAGCAGTAGTGATGACGAAACAAGTACAAGCGTATCGTCCCAGTCCCAGGATGGGTCAAAGACTCGTTCAAGCTCATTGGGAAGTTTTTCTGAGCATGATGAGTTAGATTATTATACCAAGAAACCATCTCAACATAAGATTGTTCCTCCTCATCCTCCTTTCGTCATACCAAAACTAGATGTTGTTAAAGGGCCACTTGTTCAAGAGAAGCCAAAACCAAGGTCAGTAAGAACCAGAGGTCCCAGAACACCACGTGGTCTTCAAAAAATTGTTTCTGATATTGATTCAAGTGATGAAGATGATAGAGTAATGGACGAGCTTTTGATGCATTACAGTATGAAAAGATCTAGTTCTGAATTGAAGTGGCGGAAGAAGAACACAATTAGGTACATAAAATTAGATTCAGATGGGCAGCATGAAAGAGGAACATCTCTTCCTGCTCAACTCTTAGCTTCTGTAGAACCAGAAATGCAGAGTGAAGGAGCAAAGCATGTGCATCCTAAGCTCCCAGATTATGATGACTTAACAGCTCGTCTTGCATCTATCAGAAGGAGAAGTGGCAATCATTCTTTGAATGGCAAACAAACTGTCTGTCTGTCTCTGTTATCGTGCCGTTGTCATTTGTCTGCCTCTATCCCCACACAGCAAAACGGCGCCGTGAGGTTGCCCCTCACTGTGTTTTCTTGTCCGTCTCTGACTTTACAGTTGGCAATTGCAAGTTGCAACTTTTTCCCTCTTTCATCTCCAAAATTTCATAATCCCTCTTAA 1602 0.4251 MCARKSSEVHSGAKETLQGLLRAISLSLKLVLRLLSLLNLHFLAFAYSLPFPVDYSLVTNMLDKFLKPKFYRKWYSTDLEIIKTYLDCTKSRLEAIRNKRNAVLKFLKKDIADLLKNGLDDRAYGRAEGFLVEENTSACYELVVKFIGCVSDHLQVLSKESNCPDECKEAIPSLIYAAARFADLPELRDLRTLFKEKFGDSLEPCTSKEFLEKSRPQPTKEMKIQILKKIAQEFSIKWNSRAMEEKLNMSYSSRQERPRMTSLNSNYIVNNEETLRLQSSSDDETSTSVSSQSQDGSKTRSSSLGSFSEHDELDYYTKKPSQHKIVPPHPPFVIPKLDVVKGPLVQEKPKPRSVRTRGPRTPRGLQKIVSDIDSSDEDDRVMDELLMHYSMKRSSSELKWRKKNTIRYIKLDSDGQHERGTSLPAQLLASVEPEMQSEGAKHVHPKLPDYDDLTARLASIRRRSGNHSLNGKQTVCLSLLSCRCHLSASIPTQQNGAVRLPLTVFSCPSLTLQLAIASCNFFPLSSPKFHNPS 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1626 533 MobiDBLite consensus disorder prediction 277 306 - -
Alju05g1626 533 Pfam Regulator of Vps4 activity in the MVB pathway 83 236 IPR005061 GO:0015031
Alju05g1626 533 MobiDBLite consensus disorder prediction 343 375 - -
Alju05g1626 533 MobiDBLite consensus disorder prediction 277 304 - -
Alju05g1626 533 Gene3D - 76 247 IPR042277 -
Alju05g1626 533 PANTHER IST1 FAMILY MEMBER 83 461 IPR005061 GO:0015031
Alju05g1626 533 FunFam Vacuolar protein sorting-associated protein IST1 75 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1626 Alju-ChrAlju05 47284574 47288485 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju05g1626 05 47284574 47288485 Alju05g1626 05 47284574 47288485 ECH