Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1593 ATGGGTGCTTCTCTGCCCTCCAAGGAGGCCAACCTCTTCAAGCTCATTGTTAAATCATATGAAACAAAACAATACAAAAAGGGACTCAAAGCAGCTGATGCTATTTTGAAAAAATTTCCGGACCATGGAGAAACTTTATCAATGAAGGGTTTGACATTGAATTGCATGGATCGTAAGTCTGAAGCATATGAACTTGTTCGTCAAGGACTAAAGAATGACCTCAAAAGTCATGTTTGCTGGCATGTTTTTGGTCTTCTTTATCGGTCAGACAGAGAATATAGGGAGGCCATTAAGTGCTACCGCAATGCTTTGAAAATAGATCCTGACAATATTGAAATCTTACGTGACCTATCACTTTTACAGGCTCAGATGCGAGATTTAACAGGCTTTGTTGAGACAAGACAAAAGCTCCTGACTCTTAAACCTAATCATCGCATGAACTGGATTGGCTTTGCAGTGGCCCATCATTTGAATTCTAATGCGTCCAAGGCAGTTGAAATTCTGGAAGCATATGAAGGTACCTTAGAAGATGATTATCCTCCTGAGAACGAACGGTGTGAGCATGGGGAAATGCTTTTATACAAGATCTCTTTGTTAGAGGAAAGTGGATTTCTTGAGAGAGCTCTTGAGGAGTTGCACAAAAAAGAATCAAAAATTGTTGATAAACTCGCATATAAAGAACAAGAGGTTTCACTCATAGTGAAGCTTGGTCGATTGAAAGAAGGTGAAAAATTGTATCAGGCACTTTTGTCCATGAATCCTGACAATTATAGATACTATGAAGGACTCCAAAAATGTGTTGGGTTATATTCAAAAGATGGGCATTATGCTCCGGATGAAATAGATCGGCTAGATGCTTTGTACAAATCACTTGAGCAGCAATATAAGTGGTCTTCTGCCGTGAAGAGAATACCACTTGATTTTTTGCAAGGTGACAAGTTTCGAGAAGCAGCAGAAAATTATATTCAGTCTCGCCTAACTAAGGGAGTTCCCTCGCTGTTCTCTGATCTTTCTTCTCTGTACAATCATCCTGGGAAGGCAGATATTTTGGAGCAACTTATTCTTGAGTTAGAGCGTTCAATTAGGACAACTGGTCAATACCCTGGAAGAGTGGACAAAGAGCCCCCTTCAACTCTGATGTGGACTTTGTTCTTATTGGCTCAGCATTACGACAGACTGGGCCAATATGAAATTGCTCTTTCTCCAATTGATGAAGCTATAAAGCACACACCTACTGTCATCGATCTATATTCTGTAAAGAGTCGGATACTGAAGCATGCTGGTGATTTGGCTGCTGCTGCTGCACTTGCAGATGAAGCTAGGTGCATGGATCTTGCTGATCGATACATCAATAGCGAATGTGTTAAGCTCATGTTACATGCTGATCAGGTGGCTTTGGCAGAAAAAACTGCAGTCTTGTTCACAAAAGATGGGGATCAACACAACAACCTCCATGACATGCAGTGCATGTGGTATGAGCTGGCTTCTGGTGAAAGTTATTTTCGCCAAGGTGATCTTGGCTGGGCTCTGAAGAAATTTTTAGCTGTAGAAAAGCATTATGCAGATATTACTGAAGACCAATTTGATTTCCATTCATACTGCTTAAGGAAAATGACTTTGCGAACTTATGTGGAGATGCTTAGATTACAAGATCGATTGCACTCGCATGCATATTTTCACAAAGCAGCTGCTGGAGCAATTAGATGTTACCTGAAATTGTATGATTCTCCTTTGAAGTCTACAACTGAGGAGGAGGATGACATGTCAAAGTTGCTTCCTTCTCAGAAAAAGAAATTGAGGCAAAAACAGAGAAAGGCAGAAGCACGGGCTAAAAAAGAGGCAGAAGAGAAGAATGAAGAGTCAAATGCCAGTGGTGTGTCAAAGTCTGGAAAACGGCATGTGAAACCTGTTGATCCAGATCCACGTGGTGAAAAGTTGTTGCAGGTGGAAGATCCACTATTAGAAGCCACAAAATATCTGAAGTTGCTGTTGAAGAATTCACCTGATTCATTGGAGACACATCTGCTCTCTTTTGAATTGTATATCAGAAAACAGAAGATTTTGCTTGCCTTTCAGGCTGTAAAGCAGTTATTGAGATTGGATGCTGAGCACCCGGATTCACATCGTTGCTTGATTAAATTCTTTCATAAAGTGGGATCCATGAATGTTCCTGTGACCGACAGCGAGAAACTCATTTGGAGTGTCTTAGAAGCTGAACGCCCAACAATTAGTCAGTTGCATGAGAAGTCCCTGCTTGAGGCAAACATATCTTTCCTTGAAAAACATGAAGATTCTTTGATGCACAGAGCCGCTGCCGCTGAAATGTTGTGCACCTTGGATCCCAACAGAAAATATGAAGTTGTCAAGTTGATTGAAGAGTCACCAAGTGACGGTGTGCCAAGAAATGGGATGGTTGGAGCAATTAGGGAATGGAAACTCAAAGATTGCATCGTTGTTCATAAACTTCTAGAGACAGTCCTGGTTGAGCCAGATGCTGCATTGAGATGGAAAGTGCGCTGTAATGAGCTTTTCCCTTATTCTACATACTTTGAGGGCAGCCGCAGTTCTGTTTCTCCAAACTCGGCCTACAATCAGATATGTAATAACTTCGAAAATGGGAGTATTAACCATTCAATGGATGGCCAAAATGTGGATTCCTTCCCATCAAACGGGAAACTAGACGCATTTAAAGACCTCTCCATATCACAAAGTTGA 2715 0.4118 MGASLPSKEANLFKLIVKSYETKQYKKGLKAADAILKKFPDHGETLSMKGLTLNCMDRKSEAYELVRQGLKNDLKSHVCWHVFGLLYRSDREYREAIKCYRNALKIDPDNIEILRDLSLLQAQMRDLTGFVETRQKLLTLKPNHRMNWIGFAVAHHLNSNASKAVEILEAYEGTLEDDYPPENERCEHGEMLLYKISLLEESGFLERALEELHKKESKIVDKLAYKEQEVSLIVKLGRLKEGEKLYQALLSMNPDNYRYYEGLQKCVGLYSKDGHYAPDEIDRLDALYKSLEQQYKWSSAVKRIPLDFLQGDKFREAAENYIQSRLTKGVPSLFSDLSSLYNHPGKADILEQLILELERSIRTTGQYPGRVDKEPPSTLMWTLFLLAQHYDRLGQYEIALSPIDEAIKHTPTVIDLYSVKSRILKHAGDLAAAAALADEARCMDLADRYINSECVKLMLHADQVALAEKTAVLFTKDGDQHNNLHDMQCMWYELASGESYFRQGDLGWALKKFLAVEKHYADITEDQFDFHSYCLRKMTLRTYVEMLRLQDRLHSHAYFHKAAAGAIRCYLKLYDSPLKSTTEEEDDMSKLLPSQKKKLRQKQRKAEARAKKEAEEKNEESNASGVSKSGKRHVKPVDPDPRGEKLLQVEDPLLEATKYLKLLLKNSPDSLETHLLSFELYIRKQKILLAFQAVKQLLRLDAEHPDSHRCLIKFFHKVGSMNVPVTDSEKLIWSVLEAERPTISQLHEKSLLEANISFLEKHEDSLMHRAAAAEMLCTLDPNRKYEVVKLIEESPSDGVPRNGMVGAIREWKLKDCIVVHKLLETVLVEPDAALRWKVRCNELFPYSTYFEGSRSSVSPNSAYNQICNNFENGSINHSMDGQNVDSFPSNGKLDAFKDLSISQS 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1593 904 SMART tpr_5 43 76 IPR019734 GO:0005515
Alju05g1593 904 SMART tpr_5 380 413 IPR019734 GO:0005515
Alju05g1593 904 SMART tpr_5 77 110 IPR019734 GO:0005515
Alju05g1593 904 FunFam N-terminal acetyltransferase catalytic subunit (NAT1) 505 725 - -
Alju05g1593 904 SUPERFAMILY TPR-like 191 427 IPR011990 GO:0005515
Alju05g1593 904 PIRSF NAT_A 1 818 IPR021183 -
Alju05g1593 904 Gene3D - 505 724 - -
Alju05g1593 904 ProSiteProfiles TPR repeat profile. 77 110 IPR019734 GO:0005515
Alju05g1593 904 Gene3D - 2 503 - -
Alju05g1593 904 PANTHER N-TERMINAL ACETYLTRANSFERASE-RELATED 1 826 - -
Alju05g1593 904 SUPERFAMILY TPR-like 381 707 IPR011990 GO:0005515
Alju05g1593 904 SUPERFAMILY TPR-like 18 159 IPR011990 GO:0005515
Alju05g1593 904 MobiDBLite consensus disorder prediction 606 622 - -
Alju05g1593 904 Pfam TPR repeat 84 123 - -
Alju05g1593 904 MobiDBLite consensus disorder prediction 584 646 - -
Alju05g1593 904 MobiDBLite consensus disorder prediction 631 646 - -
Alju05g1593 904 Pfam N-terminal acetyltransferase A, auxiliary subunit 187 696 IPR021183 -
Alju05g1593 904 Coils Coil 596 624 - -
Alju05g1593 904 FunFam N-terminal acetyltransferase A, auxiliary subunit 2 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1593 Alju-ChrAlju05 46523264 46537457 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju11g0791 11 9373378 9390029 Alju05g1593 05 46523264 46537457 CCT
Alju05g1593 05 46523264 46537457 Alju05g1593 05 46523264 46537457 ECH