Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1557 ATGCGTTTCTTGTCTCTTCCTCTCCCTGTCTCCTTCGCCCAGTGTACCAACACTTCTATGGCGTCCGGGTCGGCTTCTCTAATGTGGTTCCGAAAGGGTCTTAGGATTCATGACAACCCGGCCCTGGATTTCGCCCGCCAAGAGTCGGATCGTCTTTACCCGGTCTTCATTATCGACCCGCATTACATGGAGCCCGACCCCAATGCATTTTCCCCCGGTTCTACTCGTGCCGGTCTCAACCGGATTAAGTTCCTGCTTGAAAGCCTTGTGGACCTTGATTTGAACTTTAAGAAGCTCGGATCGCGACTCCTGATTCTTAAAGGTGAACCAGAAAAGGTTTTGATTCATTGCTTAAAGGAGTGGAACATCAGAAAGCTTTGCTTTGAGTATGACACTGATCCATATTATAAGGCTTTAGATATAACAGTTAAGAACTATGCAGTGGCCTCTGGGATTGAGTTTTTCTCTCCTGTGAGCCACACACTCTTCAATCCAGCGGATATTATACACAAGAATGGAGGGAAGCCACCCCTTAGTTATCAATCGTTTGTGAAGATTGCTGGACAACCGTCATGCCCTCTCTCAACTACGGTTTCCTCACTCCCTCCAGTTGGAGACCTTAGAAGTTGTGAGATTTCTGAAGTTCCTACGATCGAAGAACTTGGATACAGAAATGTTACACAGGAAGAATTCTCTCCTTTCAAAGGCGGTGAATCAGAAGCATTGAAGAGGCTGGCAGAATGCATGAAAAGAAAGGAGTTTGTGGCCAACTTTGAGAAGCCCAAGGGTAATCCAGCCGCATTTCTTAGACCAGAAACGACTATTCTATCACCATATTTGAAATTTGGTTGTTTATCCTCCAGATATTTCTACCAACAGATTCAAGATGTATATAAAACAATGCCAAAGCATACATCACCACCTGTTTCTCTTCAAGGACAGTTGTTATGGCGGGACTTTTTCTACACTGTGGCATTTGGGACTCCAAATTTTGATAAGATGAAAGGCAATAGAATATGCAAGCAGATACCTTGGAAGGATGATGACAAACTTCTGGAAGCTTGGAGGGAGGCTAGGACAGGATTTCCTTGGATTGATGCCATTATGGTTCAGCTACGTCAATGGGGTTGGATGCACCATCTGGCACGGCATTCTGTTGCATGTTTCCTTACTCGTGGCGACCTGTTTGTTCATTGGGAAAAAGGGCGTGATGTCTTTGAGAGGCTTCTTATTGATTCAGATTGGGCAATTAATAATGGAAACTGGCTTTGGCTCTCATGTTCATCCTTCTTTTATCAGTATAATCGTATTTACTCCCCAATTTCATTTGGTAAGAAGTATGACCCTAAAGGAGACTACATCAGGCATTTTCTTCCTGTCTTAAAAGATATGCCCAAGGAATACATTTATGAACCATGGACTGCTCCTCTAAGCGTTCAGAAGAAAGCTAATTGCATTATAGGCAAAGACTACCCAATGCCAGTTGTATCTCATGATTCTGCGAGCAAAGAGTGCCGAAGAAGAATGGCTGAGGCATACGCGTTGAACAAGGAACTGGATGACTCGGTTGGCGAAGAAGATCTGAAAAACTTGAGGAGGAAGCTAGATGAAGAAACACAAGAGCAAGAGACTAAACCTAAAAGATATAGACAGAAGCTGATTGGGTGA 1668 0.4394 MRFLSLPLPVSFAQCTNTSMASGSASLMWFRKGLRIHDNPALDFARQESDRLYPVFIIDPHYMEPDPNAFSPGSTRAGLNRIKFLLESLVDLDLNFKKLGSRLLILKGEPEKVLIHCLKEWNIRKLCFEYDTDPYYKALDITVKNYAVASGIEFFSPVSHTLFNPADIIHKNGGKPPLSYQSFVKIAGQPSCPLSTTVSSLPPVGDLRSCEISEVPTIEELGYRNVTQEEFSPFKGGESEALKRLAECMKRKEFVANFEKPKGNPAAFLRPETTILSPYLKFGCLSSRYFYQQIQDVYKTMPKHTSPPVSLQGQLLWRDFFYTVAFGTPNFDKMKGNRICKQIPWKDDDKLLEAWREARTGFPWIDAIMVQLRQWGWMHHLARHSVACFLTRGDLFVHWEKGRDVFERLLIDSDWAINNGNWLWLSCSSFFYQYNRIYSPISFGKKYDPKGDYIRHFLPVLKDMPKEYIYEPWTAPLSVQKKANCIIGKDYPMPVVSHDSASKECRRRMAEAYALNKELDDSVGEEDLKNLRRKLDEETQEQETKPKRYRQKLIG 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1557 555 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 24 162 IPR006050 -
Alju05g1557 555 MobiDBLite consensus disorder prediction 533 555 - -
Alju05g1557 555 SUPERFAMILY Cryptochrome/photolyase FAD-binding domain 225 516 IPR036134 -
Alju05g1557 555 Gene3D - 211 328 - -
Alju05g1557 555 Gene3D - 160 201 - -
Alju05g1557 555 PANTHER CRYPTOCHROME 25 516 IPR002081 -
Alju05g1557 555 Pfam DNA photolyase 26 187 IPR006050 -
Alju05g1557 555 Coils Coil 525 545 - -
Alju05g1557 555 Gene3D DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 329 554 - -
Alju05g1557 555 FunFam Cryptochrome-1 329 551 - -
Alju05g1557 555 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 23 207 IPR036155 -
Alju05g1557 555 Gene3D HUPs 20 159 IPR014729 -
Alju05g1557 555 Pfam FAD binding domain of DNA photolyase 313 510 IPR005101 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1557 Alju-ChrAlju05 45818456 45822323 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju05g1557 05 45818456 45822323 Alju05g1557 05 45818456 45822323 ECH