Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1553 ATGTGGCGGAGACTTGTCTCTTCTCATCTCAAATCCCTAGCTACACTCTCTGCTTCTCCTTCCCGATCTGCCCCCATCGCCGCCCGACTCTCTCTCAAGAATTCTTCTTGTCTCTCTCCATCGTCCTATTTTCTCAGCCGCCACTTCAGCACCGAGTCTGGGGATAATGTGGTTAAAAAGAAGGTTGAGGATGTAATGCCTATTGCTACTGGGCATGAGCGCGAGGAGCTTGAGGCCGACCTTCAGGGAAGGAACATTCTCGAAATAGACCATCCCGAAGGTCCTTTTGGTACAAAGGAAGCACCTGCTGTTATCAAGTCTTACTATGACAAAAGAATAGTTGGATGCCCAGGAGGTGAAGGCGAGGACGAGCATGACGTAGTCTGGTTTTGGCTGGAAAAAGACAAGCCTCATGAATGTCCAGTTTGCTCACAGTATTTTGTGCTTGAAGTGGTGGGACCCGGTGGACCACCTGATGGGCATGGTGATGACGAAGACGAACACCATTGA 510 0.5 MWRRLVSSHLKSLATLSASPSRSAPIAARLSLKNSSCLSPSSYFLSRHFSTESGDNVVKKKVEDVMPIATGHEREELEADLQGRNILEIDHPEGPFGTKEAPAVIKSYYDKRIVGCPGGEGEDEHDVVWFWLEKDKPHECPVCSQYFVLEVVGPGGPPDGHGDDEDEHH 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1553 169 CDD Cyt_c_Oxidase_Vb 59 152 IPR002124 GO:0005740|GO:0005751|GO:0006123
Alju05g1553 169 SUPERFAMILY Rubredoxin-like 59 155 - -
Alju05g1553 169 ProSiteProfiles Cytochrome c oxidase subunit Vb, zinc binding domain profile. 57 156 IPR002124 GO:0005740|GO:0005751|GO:0006123
Alju05g1553 169 FunFam Cytochrome c oxidase subunit Vb 58 152 - -
Alju05g1553 169 Gene3D Cytochrome c oxidase, subunit Vb 58 152 IPR036972 GO:0005740|GO:0005751|GO:0006123
Alju05g1553 169 PANTHER CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL 1 169 IPR002124 GO:0005740|GO:0005751|GO:0006123
Alju05g1553 169 Pfam Cytochrome c oxidase subunit Vb 69 155 IPR002124 GO:0005740|GO:0005751|GO:0006123
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1553 Alju-ChrAlju05 45794424 45799982 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju11g0818 11 9783481 9788675 Alju05g1553 05 45794424 45799982 CCT
Alju05g1553 05 45794424 45799982 Alju11g0818 11 9783481 9788675 ECH
Alju05g1553 05 45794424 45799982 Alju05g1553 05 45794424 45799982 ECH