Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1513 ATGGACAGTGTTTCGCCGACCGCCGCCCAAGATGAGGTCCTCTCCGTCGAGCTACCGGCTCCTTCGGCTTGGAAGAAACTGTTTTACCCAAAGAAAGTAGGAACACCGAGGAAAACAGAGATTGTGTTTATCGCTCCGACTGGAGAGGAAATCAGTGGAAGGAAACAACTGGAACAGTACCTAAAGGCACATCCTGGGAATCCTCCCGTATCTGAGTTTGATTGGGGAACCGGTGAGACCCCGAGGCGATCGGCTAGGATCAGCGAGAGGGTGAAGTCAACTCCCCCGGCAGCAGAAGCCGAGCCTCAAAAGAAGCGAGCTCGAAAATCATCGGGTTCAAAGAAAGATCACAAGGAATCAGAACCTGCCTCAGAAGAAGGCAAACCAAAGCCTGCTGCTGAAACTGCTGATGCTCCTAAGGAGAATGAAACAAAGCAAAATGAACAAATAAATGACACTGACAACAATAATAAGATGCAGACAAGTCAAGAGAAAGCTGAAGAAGTTGTTGCAGCAGCAGCAGCAGTAGAGGAAAAACCTGCTGGAGAAGAAGAAACTTTGAAGACTGAAGAATCACAGAAAGAAAATGGAGTTGCTGTACAGGCGAATGGGGAAGCCGATGATGCGAACAAGATGACAATAACAACTCATACAGAGGAGATGGGGATGAAGATTGATGAAGAGAGAGTTGAGAATGGGAAATTTAATGGAGACATGCGCAGTGAAGCCCCTCAAGCTCAACAACATTCATCAGCCCACCCTGTGACTTGCTAA 774 0.4767 MDSVSPTAAQDEVLSVELPAPSAWKKLFYPKKVGTPRKTEIVFIAPTGEEISGRKQLEQYLKAHPGNPPVSEFDWGTGETPRRSARISERVKSTPPAAEAEPQKKRARKSSGSKKDHKESEPASEEGKPKPAAETADAPKENETKQNEQINDTDNNNKMQTSQEKAEEVVAAAAAVEEKPAGEEETLKTEESQKENGVAVQANGEADDANKMTITTHTEEMGMKIDEERVENGKFNGDMRSEAPQAQQHSSAHPVTC 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1513 257 SUPERFAMILY DNA-binding domain 10 106 IPR016177 GO:0003677
Alju05g1513 257 MobiDBLite consensus disorder prediction 178 192 - -
Alju05g1513 257 Gene3D - 13 84 - -
Alju05g1513 257 PANTHER METHYL-CPG BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 8 238 IPR039622 -
Alju05g1513 257 MobiDBLite consensus disorder prediction 234 257 - -
Alju05g1513 257 MobiDBLite consensus disorder prediction 241 257 - -
Alju05g1513 257 MobiDBLite consensus disorder prediction 62 211 - -
Alju05g1513 257 Coils Coil 159 179 - -
Alju05g1513 257 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 10 80 IPR001739 GO:0003677
Alju05g1513 257 MobiDBLite consensus disorder prediction 149 164 - -
Alju05g1513 257 MobiDBLite consensus disorder prediction 99 148 - -
Alju05g1513 257 Pfam Methyl-CpG binding domain 17 79 IPR001739 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1513 Alju-ChrAlju05 45346378 45349454 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju05g1513 05 45346378 45349454 Alju05g1513 05 45346378 45349454 ECH