Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1494 ATGGCGCCGAGGTCCGGCAGAGGTAAATCGAATAAAGCCAAGGCAGAGAAGAAGAAGAAGGAAGAGAAAGCATCAGTGCCTTCTCTGGTCGACATTAATGTCGCCACTCCTTATGATTCTCAAGTTGTTCTCAAGGGCATCTCTACTGATAAGATTCTTGATGTGAGAAGGCTATTAGCTGTAAATGTGGACACCTGCCATTTTACAAACTACTCTCTCTCTCATGAGGTTAAAGGGCAAAGATTAAATGACAGAGTAGAGGTTGTTACTCTAAAGCCATGTTTTGTAAAAATGGTTGAAGAGGATTACATAGAGGAAGCCCAAGCTATTGCACATGTGAGGCGACTCTTGGACATTGTGGCCTGCACAACCAAGTTTGCTAAGCCTAGGCGGGCCTTGATAAGCCCAGACTCCAAAGCTAAGAAAACTAGTAAGGCCCAAAATAATCAGAAGCGGAATTCGAGCCCACCACCAACTACGCCCAATGAGGAAATCCGGGTCGGGTCGCCGGCGACTGTCTCGCCGATTTCCGATAATATAGGCATGGTAGCCATTCATCCCACGCCCAAGCTTTCAGATTTCTACGAGTTCTTCTCTTTCTCTCATCTGTCTCCTCCGATTTTACACTTGAAGGGATGTGAACTGAAGAATGGGGATGATAAACGCAAAGGAGATTACTTTCAGCTTCAGATTAAAATCGGCAACGGGAAGCTGATAGAAGTGGTGGCATCAGAGAAAGGCTTTTATACTGTGGGGAAGCAGTCTCTTCAGAGCCATTCTTTAGTGGAACTTCTGAAACAGCTCAGCCGAGGTTTTGCTAATGCATATGGATCTTTGATGAAAGCATTTTTGGAACATAATAAGTTTGGTAATCTTCCATATGGATTCCGAGCAAATACTTGGCTTGTCCCTCCATGTGTTGCCGAGAGTTCTTCAAATTTTCTTGCCCTACCTACTGAGGATGAAAGCTGGGGTGGTAATGGTGGTGGCCAGGGAAGAAACAGTGAATACAATCCTAGACCATGGGCTATGGACTACGCAATATTGGCCTCTCTTCCTTGCAAAACTGAAGAGGAGAGGGTGGTCAGAGACAGAAAAGCTTTTCTGCTTCATGGTCAATTTGTAGATACCTCAATATTTAAAGCTGTTGCAGCGATAAGACATGTCATGGTGTCAAAGTCCAATGAAAATAAGAAATTGCATTGTTCTCCGGATTCAATCCTGCATGAAGATCGTGTGGGGGACTTGTCCATAGTAGTCAAACATGATATCGGAGACACAAACCATAAAGATGATAAGAAACTTTCTAGTAAGGAAGATGCTCAAAAGAATTTGCTCAAGGGATTGACTGCAGATGAAAGTGTAATTGTCCGTGATACTTCTTCCTTGGCTGTCGTCGTTGTACGCTACTGTGGATATGTTGCAACAGTAAGTGTGGTGGGCAACATTAACACAAGGAAGCCTAAATTTCAAGATATTGAAATCGATGATCAACCAGATGGAGGGGCAAATGCTCTCAATGTCAATAGCTTGAGGCTACTGCTTCACAAGTTTGGAGCTGAGCCATCCGAAGGGAGATCATCAGTACCAACTTTGGATGATTTAGACTCTTCAAGAAATGTTGTTCGGAAGGTGATTAAAGAAAGCTTGGAAAAGAAAAGTGAGGAACCAGTTAACTCAGACAGGTCTATTCGGTGGGAACTCAGTTCTTGTTGGGTGCAACATCTGCAAAAGCAGGAAACTTCAACAGATAAAAGTTCTGAAAAAAAGGAAGATGGCCACGATGCTGTACAGGCTGTCAAAGGTCTTGGAAAGCAATTCAAATTTTTGAAGAAGAGGGAAAAGAAACCAGCTAGTTTAGATTGTACAGATCATGGAGAGCAGAATGACTCTAGACCTTTTGATGTGGAAACTGATAAAGCGGAATTAAACAATGGTGACTTAATTAGCTCTGCTGAATTGGAGAACCTTCTTTCAGAAGAAGCATTTTTGCGACTGAAAGAATCTGGAACTGGTCTGCATCTAAAGACAGTTGATGAGCTTATCAACATGACACACAAGTACTATGACGAAATTGCCTTGCCAAAACTGGTTACAGACTTTGGATCACTTGAACTTTCTCCAGTTGATGGCCGTACACTAACTGATTTCATGCATCTAAGAGGATTAAAAATGCGCTCCCTTGGTGAAGTAGTTAAGCTTGCAGAAAATCTTCCACACATTCAATCTCTTTGTATTCATGAGATGGTTACTCGAGCTTTCAAGCATCTACTCAAAGCTGTAATTGCCTCAGTTGATAATGTAGCAGACTTATCTCCCGTTATTGCATCAACTCTGAATTTCTTACTGGGGAGCTGTCAATTGGAAAATACTGACCAAAATTTGATTGAAGACAATCATCTCAGATTGCAGTGGCTACGGAAATATTTAAGCAAAAAATTTGGATGGACATTAAATGATGAATTTCAACATTTGAGGAAGTTATCAATCCTGAGAGGACTTTGTCATAAGGTTGGATTGGAATTGTTCCCAAGAGATTATGACATGGAGACCTCCCACCCATTTGGGAAATACGACATTGTCAGCCTAATTCCTGTTTGCAAGTACGTAGGATGCTCCTCAGCAGATGGACGCAATTTATTGGAATCATCCAAAATGGCTCTCGATAAAGGAAAGCTTGAGGATGCAGTAAATTATGGAACAAAGGCGTTGGCAAAGATGATGGCTGTTTGTGGTCCTTATCATCGAACTACCGCGAGTGCTTATAGTCTTCTAGCTGTGGTTCTTTACCACACTGGAGATTTTAATCAAGCAACCATATATCAGCAAAAGGCCCTGGATATAAATGAGAGGGAGCTTGGGCTTGATCATCCAGACACAATGAAAAGCTATGGGGATCTCTCTGTCTTTTATTACCGTCTGCAGCACATGGAGCTGGCTCTGAAGTATGTCAACCGTGCTCTCTTCCTCCTCCACTTCACATGTGGACTGTCTCATCCAAACACGGCAGCAACATATATAAATGTGGCAATGATGGAAGAGGGTATGGGAAATGTTCATGTGGCGCTCAGATATTTGCATGAAGCTCTTAAATGCAACAAAAGATTGTTAGGAGAAGATCATATCCAGACTGCTGCAAGCTTCCATGCCATTGCCATAGCTCTTTCATTGATGGAAGCATATTCCCTGAGTGTACAACATGAGCAAACAACCCTTAAGATACTTCAAGACAAGCTTGGACCTGAAGATCTTCGTACACAGGATGCTGCTGCGTGGCTCGACTATTTTGAATCAAAAGCAATAGAGCAACAAGAAGCAGCTAAAAATGGAACTCCAAAGCCTGATGCATCTATTGCAAGTAAAGGTCACCTTAGTGTATCAGATCTCCTGGATTTCATTAATCCTGAACAAGAGCCAAAAGGAAATGAAACTCAAAGGAAACAGCGGCGTGCAAAGATACACCCTATCACTGATAAAAACCATCAAGAACATGATCATTCAATAGCTGATGAGAACATTCCCTTAGATGGATCAAAAGATGATAAAAGCATGGAAGAAGCCAACACTCAAGCAACAAAAGCCATGCTTCATTCTGAAGAAGTGAAACAGTATGCTGAGTTCACTAGATATGTGCCTGAGACATGTGAAGTTGTTGAGGAAATATCCTCTGATGAAGGGTGGCAAGAAGCCAATTCTAAAGGGCGGTCGGGAAACACAGCCAACCGCAAGTTTGGTCGGAGGAGACCTCTTCTTGCAAAGCTGAGGGTGAACAGCTCTGAGAATTACATCGTCAGAGAAAGCAGTTGTAGGAACGACATTACATCGCCAAATAAAGTAACCCCAAAAGTCACTCCGGCCACACTATCTTCAGCTGGACAAGTAAAAGCTAGAAGCTCCACTGTAAAAGAGGAACATGTCAATCATTCAACAAGAGCTTCAATGTCCAAAACTACTTCTACTCCAGCAGCTCTTAGTCCTTTGGCTTCAAAGTCCATATCTTACAAAGAGGTGGCTCTGGCACCACCAGGTACTGTTTTAAAGCCCCTTTTGGAGAAAGCTGGAGGGGACAATGTAAAGACTGAAAGTGAGAAGTGCAATGCAGCTGAAGAAAGCTGCCAAAACTCTGTAGTTGAAGCAGTTTCTGAGCAAGACAAAAAGGAGAGGACCTGTGAACCTGACATTCAAAGAGAAAATTCTTCTTCTGAACTTGAGGAGGGTTCCCTCTCTTCTGATCAGGAAAAAGCTGCAGAAACCAATGGTAGCAAGCTTTCGGCTGCAGCGGAACCATTCAGCCCAGGAATGTTGTTTATGGCTCACCACTTGAATCCGGTTCCCATCACAAACATTTATGATACAAATGCTAGTCAAGGCATGCCTGCAGATCCTGTGCCTCCTCCTGTTGCTGCTAGGGTCCCCTGTGGGCCTAGATCATCTCTATACTACAGAACCAACTATACTTTTCGCATGAAACATGGTTATTCGAAAAATCACACCCCCATCAGGGAAAGAAGTGGATTTGGGGCTCCAAGAATCATGAATCCACATGCACCTGAGTTTGTTCCCAGAAAAGCTTTGCAAACGGAGGAGACCAATGAAACAAGTATGGCAGAAAACAACAATCTAGACGAAAACATCAGCAAGGATTTGAAGGGAAGTTCCCCAAGAAAGCGTGTTTCTGGATCTGAGGGGTCAGAACTGGCTAGGCAGATTTTGATTGGCTTGCTTGTGAAATCAGCTCAGCAAAATATTGATTCTGCTGATGATGAATCCAAAGTCAGTGGAGAAAAAGACAAGGAAATGGAAAATTCTTCTGATGCAATAGCCAAAGACAGGGCTATTATAAAAATCCTATATACTAATGAAGGAAAAAATGAGATGAATCCTGAATCAAATGGAAGTGAAGATGAAGAAAAAATAGATGCAGGGAATAATAACAACGGAGATGAAGGGTTTATAGTTGTGACTAAGAAAAGGAAAAGCAGGCAGAAGTTCACAAATGGAGTATCAGATTTGTGCAATCAGCAGTCTATCTGTGCTTCAGTCCGTTGA 5049 0.4248 MAPRSGRGKSNKAKAEKKKKEEKASVPSLVDINVATPYDSQVVLKGISTDKILDVRRLLAVNVDTCHFTNYSLSHEVKGQRLNDRVEVVTLKPCFVKMVEEDYIEEAQAIAHVRRLLDIVACTTKFAKPRRALISPDSKAKKTSKAQNNQKRNSSPPPTTPNEEIRVGSPATVSPISDNIGMVAIHPTPKLSDFYEFFSFSHLSPPILHLKGCELKNGDDKRKGDYFQLQIKIGNGKLIEVVASEKGFYTVGKQSLQSHSLVELLKQLSRGFANAYGSLMKAFLEHNKFGNLPYGFRANTWLVPPCVAESSSNFLALPTEDESWGGNGGGQGRNSEYNPRPWAMDYAILASLPCKTEEERVVRDRKAFLLHGQFVDTSIFKAVAAIRHVMVSKSNENKKLHCSPDSILHEDRVGDLSIVVKHDIGDTNHKDDKKLSSKEDAQKNLLKGLTADESVIVRDTSSLAVVVVRYCGYVATVSVVGNINTRKPKFQDIEIDDQPDGGANALNVNSLRLLLHKFGAEPSEGRSSVPTLDDLDSSRNVVRKVIKESLEKKSEEPVNSDRSIRWELSSCWVQHLQKQETSTDKSSEKKEDGHDAVQAVKGLGKQFKFLKKREKKPASLDCTDHGEQNDSRPFDVETDKAELNNGDLISSAELENLLSEEAFLRLKESGTGLHLKTVDELINMTHKYYDEIALPKLVTDFGSLELSPVDGRTLTDFMHLRGLKMRSLGEVVKLAENLPHIQSLCIHEMVTRAFKHLLKAVIASVDNVADLSPVIASTLNFLLGSCQLENTDQNLIEDNHLRLQWLRKYLSKKFGWTLNDEFQHLRKLSILRGLCHKVGLELFPRDYDMETSHPFGKYDIVSLIPVCKYVGCSSADGRNLLESSKMALDKGKLEDAVNYGTKALAKMMAVCGPYHRTTASAYSLLAVVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLSVFYYRLQHMELALKYVNRALFLLHFTCGLSHPNTAATYINVAMMEEGMGNVHVALRYLHEALKCNKRLLGEDHIQTAASFHAIAIALSLMEAYSLSVQHEQTTLKILQDKLGPEDLRTQDAAAWLDYFESKAIEQQEAAKNGTPKPDASIASKGHLSVSDLLDFINPEQEPKGNETQRKQRRAKIHPITDKNHQEHDHSIADENIPLDGSKDDKSMEEANTQATKAMLHSEEVKQYAEFTRYVPETCEVVEEISSDEGWQEANSKGRSGNTANRKFGRRRPLLAKLRVNSSENYIVRESSCRNDITSPNKVTPKVTPATLSSAGQVKARSSTVKEEHVNHSTRASMSKTTSTPAALSPLASKSISYKEVALAPPGTVLKPLLEKAGGDNVKTESEKCNAAEESCQNSVVEAVSEQDKKERTCEPDIQRENSSSELEEGSLSSDQEKAAETNGSKLSAAAEPFSPGMLFMAHHLNPVPITNIYDTNASQGMPADPVPPPVAARVPCGPRSSLYYRTNYTFRMKHGYSKNHTPIRERSGFGAPRIMNPHAPEFVPRKALQTEETNETSMAENNNLDENISKDLKGSSPRKRVSGSEGSELARQILIGLLVKSAQQNIDSADDESKVSGEKDKEMENSSDAIAKDRAIIKILYTNEGKNEMNPESNGSEDEEKIDAGNNNNGDEGFIVVTKKRKSRQKFTNGVSDLCNQQSICASVR 1682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1494 1682 CDD CLU-central 708 849 IPR033646 -
Alju05g1494 1682 Gene3D Tetratricopeptide repeat domain 888 1122 IPR011990 GO:0005515
Alju05g1494 1682 ProSiteProfiles TPR repeat profile. 919 952 IPR019734 GO:0005515
Alju05g1494 1682 ProSiteProfiles Clueless (Clu) domain profile. 320 587 IPR025697 -
Alju05g1494 1682 MobiDBLite consensus disorder prediction 1366 1421 - -
Alju05g1494 1682 MobiDBLite consensus disorder prediction 1401 1419 - -
Alju05g1494 1682 SMART tpr_5 961 994 IPR019734 GO:0005515
Alju05g1494 1682 SMART tpr_5 1003 1036 IPR019734 GO:0005515
Alju05g1494 1682 SMART tpr_5 919 952 IPR019734 GO:0005515
Alju05g1494 1682 MobiDBLite consensus disorder prediction 1 24 - -
Alju05g1494 1682 MobiDBLite consensus disorder prediction 1275 1297 - -
Alju05g1494 1682 MobiDBLite consensus disorder prediction 1380 1400 - -
Alju05g1494 1682 MobiDBLite consensus disorder prediction 1526 1564 - -
Alju05g1494 1682 FunFam Tetratricopeptide repeat (TPR)-like superfamily protein 874 1124 - -
Alju05g1494 1682 MobiDBLite consensus disorder prediction 140 171 - -
Alju05g1494 1682 Pfam Tetratricopeptide repeat 1002 1076 - -
Alju05g1494 1682 Pfam Tetratricopeptide repeat 918 988 - -
Alju05g1494 1682 MobiDBLite consensus disorder prediction 1275 1322 - -
Alju05g1494 1682 SUPERFAMILY TPR-like 956 1080 IPR011990 GO:0005515
Alju05g1494 1682 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 10 1412 IPR027523 GO:0006996
Alju05g1494 1682 MobiDBLite consensus disorder prediction 133 171 - -
Alju05g1494 1682 MobiDBLite consensus disorder prediction 1588 1603 - -
Alju05g1494 1682 SUPERFAMILY TPR-like 885 988 IPR011990 GO:0005515
Alju05g1494 1682 MobiDBLite consensus disorder prediction 1582 1603 - -
Alju05g1494 1682 MobiDBLite consensus disorder prediction 1628 1643 - -
Alju05g1494 1682 MobiDBLite consensus disorder prediction 1526 1547 - -
Alju05g1494 1682 Pfam Translation initiation factor eIF3 subunit 135 706 848 IPR033646 -
Alju05g1494 1682 Pfam Mitochondrial function, CLU-N-term 49 120 IPR028275 -
Alju05g1494 1682 MobiDBLite consensus disorder prediction 1140 1182 - -
Alju05g1494 1682 MobiDBLite consensus disorder prediction 1134 1182 - -
Alju05g1494 1682 MobiDBLite consensus disorder prediction 1620 1649 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1494 Alju-ChrAlju05 45083223 45094992 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju05g1494 05 45083223 45094992 Alju05g1494 05 45083223 45094992 ECH