Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1489 ATGGGGGGAGCTTGTTCTAGGAAGCGAGATCAGGATAGTGAAGATGGTTCTCATAGAAGACTTTCACGAAGATATTACAAAAGTGGGAGTTTTAAATGGTTGAATTCATCATTTTCTTACCCTTCTATAGATTATCATTTGCAGAAAGGAGAATGTCCATCATTGTTGGACTTGTGTATCCGGAAAATATGCGAGGAGATTCATAATTATAGCACGTTTTCTTCAATCCCACGGGACATAAGTCAGCAAATTCTTAATGAATTGGTTTATTCCCAACGTCTAACCGGTGCTTCCTTCAAAGCTTTTCAAGATTGTTCTCTCCAGGATTTCTACTTGGGAGAATATCCTGGTGTGAATGACAGTTGGATGCAAGTTATCTCATCGCAAGGGTCATCTGTACTATCTGTGGATCTTTCTGGGTCTGATGTCACTGATTATGGGTTGACTTATCTCAAAGATTGCCTAAATCTTTTAACCTTGAATCTTAATCACTGTGAGCAGATTTCTGACCATGGTCTGGAGTATATCAATGGTCTGTCAAAGTTGACAAGTTTGAGTTTTAGAAGAAACAATGCCATTTCTGCAGAAGGAATAAGTTCATTTTCTGCTCTTGTTAACTTGGTTAAGTTGGATTTGGAGAGATGTCCTGGGATTCATGGGGGCCTTGTTCATCTTCAAGATTTAACCAAGCTTGAATCTCTAAATATGAAGTGGTGTAATTGCATAACAGATTCTGACATGAAGCCTTTATCAGAGCTTACAAACTTGAAGAGTCTGGAGATTTCATGCAGTAAAGTGACAGATTTCGGTGTCACTTTCTTGAAAGGATTACAAAAGCTTGCCCTGTTAAATTTGGAAGGATGCCTTGTCACAGCTGCATGCTTGGATTCTCTAGCAGAGCTTCCTTCCCTGTCAAGCTTGAATCTCAATAGATGTAATCTTTCAGATGAAGGATGTGAAAAGTTTTCGCGACTGCAAAATTTGAAAGTGCTAAACTTGGGATTCAGTGACATAACAGATGCATGTTTAGCATACTTAAAAGGATTGACAAAATTAGAGAGCTTGAATCTAGATTCATGTAGGATTGGTGATGAAGGAATGATCAATCTGTCAGGCCTTCTGCAGTTGAAATGCCTGGAATTGTCTGATACGGAAGTTGGTAGCAGTGGGCTCCACCATATATCAGGATTGTCTAGTCTGGAGAAGATAAACTTGTCATTCACCATGATTAGTGATGGTGGTTTAAGGAAATTGTCTGGACTCTCATCTCTGAAGTCACTTAATTTGGATGCTCGCCAAATTACTGATTCTGGACTAGCAGCCCTTACAAGTTTGACTGGGCTTACTGACCTGGATTTGTTTTGTGCACGAATCACAGATTCTGGAACGAACTATTTGAAAAACTTTAAGAACCTGAGGTCACTGGAAATATGTGGTGGAGGATTGACTGATGACGGTGTCAAAAATATCAAAGAGCTTTCATCTCTGATGTGCTTGAATTTATCACAGAACTGCAGTCTTACAGACAAATCCCTGGAATTAATTTCTGGGCTCCCGAAGCTGATCTCTTTGAACGTTTCCAATTCTAATGTCACCAAGGCTGGTCTGCAGCATCTTAAAAAGCTCAAAAACTTGAGATCTCTGTCATTGGAGTCCTGTAAGGTGACTGCAAATGACATTAGGAAACTTAAAGAAGACCTCCCTAATCTGGTTAACTTTCGGCCAGAATAG 1731 0.3969 MGGACSRKRDQDSEDGSHRRLSRRYYKSGSFKWLNSSFSYPSIDYHLQKGECPSLLDLCIRKICEEIHNYSTFSSIPRDISQQILNELVYSQRLTGASFKAFQDCSLQDFYLGEYPGVNDSWMQVISSQGSSVLSVDLSGSDVTDYGLTYLKDCLNLLTLNLNHCEQISDHGLEYINGLSKLTSLSFRRNNAISAEGISSFSALVNLVKLDLERCPGIHGGLVHLQDLTKLESLNMKWCNCITDSDMKPLSELTNLKSLEISCSKVTDFGVTFLKGLQKLALLNLEGCLVTAACLDSLAELPSLSSLNLNRCNLSDEGCEKFSRLQNLKVLNLGFSDITDACLAYLKGLTKLESLNLDSCRIGDEGMINLSGLLQLKCLELSDTEVGSSGLHHISGLSSLEKINLSFTMISDGGLRKLSGLSSLKSLNLDARQITDSGLAALTSLTGLTDLDLFCARITDSGTNYLKNFKNLRSLEICGGGLTDDGVKNIKELSSLMCLNLSQNCSLTDKSLELISGLPKLISLNVSNSNVTKAGLQHLKKLKNLRSLSLESCKVTANDIRKLKEDLPNLVNFRPE 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1489 576 Gene3D Ribonuclease Inhibitor 298 388 IPR032675 -
Alju05g1489 576 Gene3D Ribonuclease Inhibitor 220 297 IPR032675 -
Alju05g1489 576 Gene3D Ribonuclease Inhibitor 67 219 IPR032675 -
Alju05g1489 576 Gene3D Ribonuclease Inhibitor 398 479 IPR032675 -
Alju05g1489 576 Gene3D Ribonuclease Inhibitor 480 572 IPR032675 -
Alju05g1489 576 SUPERFAMILY RNI-like 126 438 - -
Alju05g1489 576 Pfam Leucine rich repeat 254 314 IPR001611 GO:0005515
Alju05g1489 576 Pfam Leucine rich repeat 471 529 IPR001611 GO:0005515
Alju05g1489 576 PANTHER UNCHARACTERIZED 316 476 - -
Alju05g1489 576 SMART LRR_RI_2 301 330 - -
Alju05g1489 576 SMART LRR_RI_2 542 569 - -
Alju05g1489 576 SMART LRR_RI_2 228 258 - -
Alju05g1489 576 SMART LRR_RI_2 349 376 - -
Alju05g1489 576 SMART LRR_RI_2 397 423 - -
Alju05g1489 576 FunFam Predicted protein 118 219 - -
Alju05g1489 576 FunFam Leucine-rich repeat family protein 220 298 - -
Alju05g1489 576 FunFam F-box/LRR-repeat protein 14 299 382 - -
Alju05g1489 576 Pfam Leucine Rich repeat 229 251 IPR001611 GO:0005515
Alju05g1489 576 Pfam Leucine Rich repeat 350 371 IPR001611 GO:0005515
Alju05g1489 576 Pfam Leucine Rich repeat 180 202 IPR001611 GO:0005515
Alju05g1489 576 Pfam Leucine Rich repeat 154 176 IPR001611 GO:0005515
Alju05g1489 576 SMART LRR_CC_2 469 493 IPR006553 -
Alju05g1489 576 SMART LRR_CC_2 349 373 IPR006553 -
Alju05g1489 576 SMART LRR_CC_2 154 179 IPR006553 -
Alju05g1489 576 SMART LRR_CC_2 518 542 IPR006553 -
Alju05g1489 576 SMART LRR_CC_2 421 445 IPR006553 -
Alju05g1489 576 SMART LRR_CC_2 228 253 IPR006553 -
Alju05g1489 576 SMART LRR_CC_2 301 325 IPR006553 -
Alju05g1489 576 SUPERFAMILY L domain-like 370 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1489 Alju-ChrAlju05 44996056 45003195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1489 106 427 Receptor kinase-like Gene Family AT5G51350 27.108 3.03e-10 61.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju05g1489 05 44996056 45003195 Alju05g1489 05 44996056 45003195 ECH