Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1287 ATGGCGGCAACCCCACCACAAGGTTCGGATCGTACAACCGAAGAGGTAGCAGCTGAACCTGACCAAATGAAGGATCAGCTTCATTCCTCAATACCGGCTAGGTCAATTGCTTCTAATTCTTCTCAGGATGCTACCACGGGTCATTTGAGGGAGACAAGTCAGTCAGGATCATTTGTTTCAGGTGGTGGCAGTCCTCTCTATCCTCCTAATGTCTATGCCCCACAGGCCCAGGCTTTCTTCTATCCAGGTTTTGAAAATGCCAACGGAGAATGGGATGATTATCCTCCATATATCAATTCTGAAGGATTGGAAATTGGATCACCGGGTCTCTACAATGATAATTCATCTCTTCTTTTCCATTCTGGATATGGCTTCAACCCACAAATGCCTTATGGCCCATATTCCCCTGTGACAACACCATTGCCTTCTGTAGGTGGAGATCCACAATTATACTCCCCCCAGCAATTTCCATACTCTGGGCCACCTTATTACCATCAGCTAGTTTCCCCTAGCTTACCATATATTTCTTCGCCAACTCCAGCTTCCCAGCCAGAGCTCACTAACATGGTAGGTGTTGATCGACCAGGTGATAGCATGGTTTTGGGACCAAGACCTGGCTATCCTTCAATGGGATCCTTTGGTAGAGGTAGTTTTCCTGGAGCGCTGGGTTCTTTTGGTTTTCATGATTCCCAACAAGGATTTGATGGATCAAGATCTGCGGGAAATGGAATCTGGTCAGATAGCTCAAAACCCTCAGACAGGCAGATGTCCATGATGCCCCTATCACCAGCAGTATCTCCACAGCCTTTTGGGTCATTTGGGCAGAGTGTTGGAATGGCTTCTCATCAACAACCACCATTGTATGGGTTTGGATCTGGATCTGGTTTAATATCCTATGGTAGAGACTATGTGCCTAACCAGGGCTCTAGATTTGGTGGCACTGCCATTTCCAGTCTTGGGGTTAATGACAGGAACTTTCTTTCTCTTGAAAATAGCAGACGGCGTGACAGGGGAATGCCTTCGTTTTGCAGTTGTGATGGTACTCATGATGTACTACTCAGTGAGCAGAATCGAGGTCCTAGGGCCTCAAAACATAAGAACAACTTGTTAGCTGAAAATGTTTCTGTTGATAATAGTAAAAAGAGTGCTTCTACTACCAAGTTCCATAATGAATCAATTAACCGGCCAGAATTTATAACAGATTATGAAGACGCCAAATTTTTTGTCATCAAATCTTATAGTGAAGATAATGTGCACAAGAGCATCAAATATGGTGTCTGGGCCAGTACACCAAATGGAAATAGAAAGTTAGATGCTGCGTATCGCCAAGCAAAGGAGAAGCAAGATGCCTGCCCTGTATTTCTATTATTTTCGGTGAATGCTAGTGCTCAGTTTTGTGGGGTGGCTGAAATGGTTGGGCCTGTTGATTTTGACAAGAGTGTGGATTATTGGCAACAAGATAAGTGGAGCGGACAATTTCCTGTCAAGTGGCACATAATTAAAGATGTTCCTAACAGTCAGTTTCGACACATTGTTCTTGAAAATAATGACAACAAGCCTGTGACCAACAGTCGAGATACTCAAGAGGTAAAATTGCAGCAGGGGATTGAAATGTTGACCATTTTCAAGAATTATGAAGCCGAAATGTCTATCCTAGATGACTTCGATTACTATGAAGACCGGCAAAAGATCATGCATGAACGGAAGGCAAGGCAGCAAGCCAGCCTGATACCTATGCCGGTTGGAGAAGGTGAACGCAAGACTTCTGCTCCTCCTAACATAAATGGTGATTTTGTGAAGCAGATGTCAAAGAGCTTTGCACAAGTTGTTCGCTTAGAAGACAATAGTACTGAAGCGACGGCTACCGATAGAGGTAGTTTAGCCACTGACGCCTCTAATGGTACTGCTGTTAAGCTGGATGGTATTCCTGTGACAAGCTCTTCACTATAA 1950 0.4431 MAATPPQGSDRTTEEVAAEPDQMKDQLHSSIPARSIASNSSQDATTGHLRETSQSGSFVSGGGSPLYPPNVYAPQAQAFFYPGFENANGEWDDYPPYINSEGLEIGSPGLYNDNSSLLFHSGYGFNPQMPYGPYSPVTTPLPSVGGDPQLYSPQQFPYSGPPYYHQLVSPSLPYISSPTPASQPELTNMVGVDRPGDSMVLGPRPGYPSMGSFGRGSFPGALGSFGFHDSQQGFDGSRSAGNGIWSDSSKPSDRQMSMMPLSPAVSPQPFGSFGQSVGMASHQQPPLYGFGSGSGLISYGRDYVPNQGSRFGGTAISSLGVNDRNFLSLENSRRRDRGMPSFCSCDGTHDVLLSEQNRGPRASKHKNNLLAENVSVDNSKKSASTTKFHNESINRPEFITDYEDAKFFVIKSYSEDNVHKSIKYGVWASTPNGNRKLDAAYRQAKEKQDACPVFLLFSVNASAQFCGVAEMVGPVDFDKSVDYWQQDKWSGQFPVKWHIIKDVPNSQFRHIVLENNDNKPVTNSRDTQEVKLQQGIEMLTIFKNYEAEMSILDDFDYYEDRQKIMHERKARQQASLIPMPVGEGERKTSAPPNINGDFVKQMSKSFAQVVRLEDNSTEATATDRGSLATDASNGTAVKLDGIPVTSSSL 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1287 649 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 90 617 IPR045168 -
Alju05g1287 649 FunFam YTH domain family 1, isoform CRA_a 384 557 - -
Alju05g1287 649 Gene3D ph1033 like domains 381 557 - -
Alju05g1287 649 MobiDBLite consensus disorder prediction 230 260 - -
Alju05g1287 649 ProSiteProfiles YTH domain profile. 405 542 IPR007275 GO:0003723
Alju05g1287 649 MobiDBLite consensus disorder prediction 28 61 - -
Alju05g1287 649 MobiDBLite consensus disorder prediction 1 61 - -
Alju05g1287 649 MobiDBLite consensus disorder prediction 569 594 - -
Alju05g1287 649 CDD YTH 406 542 IPR007275 GO:0003723
Alju05g1287 649 MobiDBLite consensus disorder prediction 176 198 - -
Alju05g1287 649 Pfam YT521-B-like domain 405 543 IPR007275 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1287 Alju-ChrAlju05 40855103 40864934 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju05g1287 05 40855103 40864934 Alju05g1287 05 40855103 40864934 ECH