Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g1182 ATGTATGGATGGCAATATATGATGAAGTACCGAAGCGCCAAGCGGATTGCGAAGGCAGTTGATATCAAACTCCTTGGATCCCTTGACAGAGATGATATAAGAAAAATCTGTGGTGATAATTCTCCTGAGTGGATATCTTTTCCTGTATATGAACAGGTGAAATGGCTAAACAAGCAGCTGAGCAAACTGTGGCCATCTGTGGCAGAAGCTGGATCAATGGTGATCAAAGAATCTGTTGAACCACTACTTGAAGAGTACAGACCTCCCGGAATTACTTCATTGAAATTCAGCAAACTGTCACTCGGAAATGTTGCCCCAAAGATTGAAGGTATTCGTGTTCAGAGTCTTAAGGAAGGCCAAATCATAATGGACATTGATTTCCGATGGGGTGGTGATCCCAGCATTATTTTGGCTGTTGAAGCGGCTCTTGTTGCTTCAATCCCCATTCAGTTGAAAGATCTCCAAGTTTTCACGATTATCCGTGTTATCTTCCAACTTGCTGAAGAGATACCCTGTATTTCTGCTGTTGTTGTTGCCCTGCTTGCTGAGCCAAAACCTCGGATTGATTACACTCTTAAAGCCGTTGGAGGAAGTTTGACAGCTATTCCTGGATTATCAGATATGATTGATGACACTGTGAACTCAATAGTTACTGATATGCTTCAATGGCCTCATAGGATCGTTGTTCCACTTGGTGGTGTACCTGTTGATACTAGTGAACTGGAGCTTAAACCTCAGGGAAATCTCACAGTGAATGTTCTGAAAGCCAATGATTTGAAGAATATGGAAATGATTGGGAAATCTGATCCATATGTAGTTGTGCATATTCGACCTTTATTTAAGGTTAAAACCAAGGTTATTGACAACAACCTGAATCCTGTTTGGGATGAGACGTTCAACTTGATTGTCGAAGACAAGGAGACTCAGTCCGTCATTCTAGAGGTTTTTGATAAAGATATTGGGCAAGATAAGAGATTGGGAATAGTAAAATTACCCCTTATTGATCTCGAGTCAGAAACTGGAAAGGAAATTGAGTTGAGGCTGCTGCCTTCGCTGGACACACTTAAAGTAAAAGATAAGAAGGACCGAGGATCATTGACAATTAAGGTATTATACCATCAGTATAATAAAGAAGAGCAGTTGAAGGCTCTAGAAGCTGAGAAGAAGATACTAGAAGAAAGGAAGAAGCTGAAAGAGGAAGGAGTTATAGGAAGCACCATGGATGCTATAGATGGAGCAGCATCGCTTGTTGGTTCTAGTGTAGGAATGGTTGGTACCGGTGTTCTTACTGGTGCTGGCCTTGTCGGAAGTGGAGTTGGTGCTGGGGTGGGGTTTGTAGGTAGCGGTCTTGGAGCCGTTGGCAGCGGATTGAGCAGGGCAGGTAAGTTCATGGGCCGGACTATCACGGGAGGACATAGCAGTGCGAGGAGGAGTGGTGCAACTACTCCGGTCAATAATGCTCAGGAAAATGGCAGCGATGCCAAGCCCCTGTGA 1494 0.4357 MYGWQYMMKYRSAKRIAKAVDIKLLGSLDRDDIRKICGDNSPEWISFPVYEQVKWLNKQLSKLWPSVAEAGSMVIKESVEPLLEEYRPPGITSLKFSKLSLGNVAPKIEGIRVQSLKEGQIIMDIDFRWGGDPSIILAVEAALVASIPIQLKDLQVFTIIRVIFQLAEEIPCISAVVVALLAEPKPRIDYTLKAVGGSLTAIPGLSDMIDDTVNSIVTDMLQWPHRIVVPLGGVPVDTSELELKPQGNLTVNVLKANDLKNMEMIGKSDPYVVVHIRPLFKVKTKVIDNNLNPVWDETFNLIVEDKETQSVILEVFDKDIGQDKRLGIVKLPLIDLESETGKEIELRLLPSLDTLKVKDKKDRGSLTIKVLYHQYNKEEQLKALEAEKKILEERKKLKEEGVIGSTMDAIDGAASLVGSSVGMVGTGVLTGAGLVGSGVGAGVGFVGSGLGAVGSGLSRAGKFMGRTITGGHSSARRSGATTPVNNAQENGSDAKPL 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g1182 497 Coils Coil 374 401 - -
Alju05g1182 497 MobiDBLite consensus disorder prediction 468 497 - -
Alju05g1182 497 MobiDBLite consensus disorder prediction 471 497 - -
Alju05g1182 497 PRINTS C2 domain signature 264 276 IPR000008 -
Alju05g1182 497 PRINTS C2 domain signature 289 302 IPR000008 -
Alju05g1182 497 PRINTS C2 domain signature 311 319 IPR000008 -
Alju05g1182 497 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 1 419 IPR045050 GO:0008289
Alju05g1182 497 CDD C2 249 343 - -
Alju05g1182 497 Gene3D C2 domain 242 401 IPR035892 -
Alju05g1182 497 Pfam C2 domain 247 343 IPR000008 -
Alju05g1182 497 Pfam Synaptotagmin-like mitochondrial-lipid-binding domain 51 231 IPR039010 -
Alju05g1182 497 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 247 374 IPR035892 -
Alju05g1182 497 CDD SMP_SYT 42 231 - -
Alju05g1182 497 ProSiteProfiles C2 domain profile. 230 348 IPR000008 -
Alju05g1182 497 SMART C2_3c 248 345 IPR000008 -
Alju05g1182 497 FunFam synaptotagmin-4 isoform X1 242 400 - -
Alju05g1182 497 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 49 232 IPR031468 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g1182 Alju-ChrAlju05 37756024 37766209 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g1182 232 333 Lipid Metabolism Gene Families AT3G61300 31.068 7.26e-09 56.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju05g1182 05 37756024 37766209 Alju05g1182 05 37756024 37766209 ECH