Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0042 ATGAAGGCCTTACCTATTGGGCTCAATATAAACACTCTTCACAATGGAAAATTGGGAAAGAAAGGAGGGGGTGCTTTTCTATCTGCCACCACCATGGAAGCAGACAGCTCCGATTTGGGTTCTGAAACGATCCCAGACGTGAAGCAGGAGCGCATTTTGAGAGTCCAGATTGATACTTCGGCTCCCTTTGAATCCGTGAAGGAGGCCGTCACTCGATTTGAGGTTCTTGGCGTCTGCAAATCCTTCCATCATAATCTCCCCACTCTTGAGCAGGAAACACCAGAGAATGAGCATGACACTGGAAAGCTAGAGGAGGAGACAGCAGTATTGGAGAAAGAATTGATCCTGAAAGAAAAGGAAACTCTGGATGTCTTAAGAGAACTGGAAAGCGCCAAAAGGCTCGTCGAGGATTTAAAGTCAAAGCTGCAAAAGGAAGAATGTGGAGCCTATTTGAAGAACAAAGAAGAGGATAAGGAGAACCAATTGGACACGTTGAACCAAGGCTTTAGTCCCTACCCTTCATCTGAACCAGGTCTGATATTAATGGAGCTGAAGCAGGCCAAGTTGAACTTAACCAAAACTACAAATGATATAGCTGATGTACGAGCTTCTGTTGTATCACTTAATAAGAAGTTAGAGAAGGAAAGAGCCTCACTCGAGAGAACTCGTGAGAAGTTAACTCGCAATTCTTCAAAATTATCTTCTCTTGAGGAAGAGTTGAGCCAGACAAGACTAAGACTTCAAGTTGCAAAAGATGATCCGTCGGATATCACAAAAGAGCTCCACAGGTTGTGTTCTGAGGCAGAACATTTCAAAAGAATGGGAGAAGCTGCAAAATCAGAAGTCTTGAGAACCATGTCTGAGATTGAACGGACAAAAGGTATGATAAGGACAGCTGAATTAAGATTGGCTGCTGCTAGGAAGATGAAGCAAGCTGCTAGAGCTGCAGAATCAGCTTCCTTAGCAGAAATTAATGTACTATCTAATAATCTCAAGGGCTCATCTGAAGTGGTAACTCTTTCATTTGAAGAGTATAATGCTCTAACATCTAAAGCTCTAGAGGCAGAGGAAAACTCGAAGAGAAAAGTTACAGATGCCATGCTCCAGGTTGATGAAGCGAACTTATCGAAAACGGAGATCCTGAAAAGGGTGGAGGAGGCCACAAAAGAAGTTCAGACTTGCAAGAGAGATTTAGAAGAAGCCATGGAAAGAGTAGGGGCTGCAAATAGAGGGAAGCTAGCAGTTGAAGAGGCCTTAAGGAAGGGTCACAAAAGAAGGTCTTCTTCTTCACGTAACTCAACCAAGTTCAAAAATTCTCACCCTTCATCTCATCATCGAAGAGATTCTCTGTTTGTTGGTGTAAATGGACTGGAACTGGAAGATGATGAAGCCAAACCAGATGTTCCAAAGACAGTTTTATCAATAGGAGAAATACTGAGCAGGAAGCTGCTTCTTTCACAGGAGTTTGAAGCAGGATCGCTGGGTCACATGCTTGGAAAACAAAAGGATGATTCATACTTCTGTAAGCAGTTTTGTGCAAAGAGAAAGAAATTCGGGTTTGCTGGATTGTCACATCTTTTGGGAAATAAACAGAAGAAAAAGAAGCCAACTCTGAATTTGAGGTTTTTAGTGCCGAATAAAAGCAACATGGAGGAGAGAACAGGGCTCTTATTTCTTGTTGTGTTGATTTCTGCTTGGGTTTGTGATGCCAGAGAATTGGCTCTTCCTGATCTTTGGAGAAATAATACAGCAAAATCAGACTATTCTGAACTAGCCAAGAAACAAGATGTTTGTGCACTTTGTGAGGAATATATTACCGACGCTCTTGATTTCCTGACTAAAAACAAGACTCAGGATGAGATCATTGATATCCTTTACCACGCATGTCACAAGCTGCACCCTTTAGAGCAGCAGTGCTTAAATTTGGTGGACCATTATGCTACCCTCTTTTTCTTAGAACTAGCTTCAATTCAACCTGGAGAACTTTGTAAAAAGGCCCATCTATGTCAGCAAATTGCAAAGATTTCGTCACAAGTCCAAGAAGATAGCTGTGGATTTTGCAGAGATGCTGTTTCAGAATTATTGGTTAAGTTGAAAGATCCTGACACTGAGCTAGATATAATTGAGACATTATTGAGGGTGTGCCATTCCATGGAGAAGTATGAACAAAAGTGTAAGAAGATGGTTTTCGTTTATGGACCGGTGATGCTTGTCAGAGCAGAGAAGTTCCTGGAAAGAACAGATATATGCACTGAATTACATGCCTGCAAAGCTTCCACAGTTGATATGGAAGCCGGAGACATGAAAGAAACTCCATTGCTTGCCGACTCTTAA 2334 0.4195 MKALPIGLNINTLHNGKLGKKGGGAFLSATTMEADSSDLGSETIPDVKQERILRVQIDTSAPFESVKEAVTRFEVLGVCKSFHHNLPTLEQETPENEHDTGKLEEETAVLEKELILKEKETLDVLRELESAKRLVEDLKSKLQKEECGAYLKNKEEDKENQLDTLNQGFSPYPSSEPGLILMELKQAKLNLTKTTNDIADVRASVVSLNKKLEKERASLERTREKLTRNSSKLSSLEEELSQTRLRLQVAKDDPSDITKELHRLCSEAEHFKRMGEAAKSEVLRTMSEIERTKGMIRTAELRLAAARKMKQAARAAESASLAEINVLSNNLKGSSEVVTLSFEEYNALTSKALEAEENSKRKVTDAMLQVDEANLSKTEILKRVEEATKEVQTCKRDLEEAMERVGAANRGKLAVEEALRKGHKRRSSSSRNSTKFKNSHPSSHHRRDSLFVGVNGLELEDDEAKPDVPKTVLSIGEILSRKLLLSQEFEAGSLGHMLGKQKDDSYFCKQFCAKRKKFGFAGLSHLLGNKQKKKKPTLNLRFLVPNKSNMEERTGLLFLVVLISAWVCDARELALPDLWRNNTAKSDYSELAKKQDVCALCEEYITDALDFLTKNKTQDEIIDILYHACHKLHPLEQQCLNLVDHYATLFFLELASIQPGELCKKAHLCQQIAKISSQVQEDSCGFCRDAVSELLVKLKDPDTELDIIETLLRVCHSMEKYEQKCKKMVFVYGPVMLVRAEKFLERTDICTELHACKASTVDMEAGDMKETPLLADS 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0042 777 SMART sapb_4 596 669 IPR008139 -
Alju05g0042 777 SMART sapb_4 682 756 IPR008139 -
Alju05g0042 777 ProSiteProfiles Saposin B type domain profile. 680 760 IPR008139 -
Alju05g0042 777 Coils Coil 370 404 - -
Alju05g0042 777 Pfam Saposin-like type B, region 1 682 718 IPR007856 GO:0006629
Alju05g0042 777 Pfam Saposin-like type B, region 1 596 632 IPR007856 GO:0006629
Alju05g0042 777 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 56 146 - -
Alju05g0042 777 Coils Coil 125 148 - -
Alju05g0042 777 Pfam Weak chloroplast movement under blue light 182 422 IPR008545 -
Alju05g0042 777 Pfam Weak chloroplast movement under blue light 55 148 IPR008545 -
Alju05g0042 777 SUPERFAMILY Saposin 682 758 IPR011001 -
Alju05g0042 777 ProSiteProfiles Saposin B type domain profile. 594 673 IPR008139 -
Alju05g0042 777 SUPERFAMILY Saposin 595 670 IPR011001 -
Alju05g0042 777 Coils Coil 296 316 - -
Alju05g0042 777 Coils Coil 202 253 - -
Alju05g0042 777 Gene3D - 593 671 - -
Alju05g0042 777 Gene3D - 679 759 - -
Alju05g0042 777 FunFam Pulmonary surfactant-associated protein B 680 758 - -
Alju05g0042 777 Gene3D - 180 351 - -
Alju05g0042 777 MobiDBLite consensus disorder prediction 418 449 - -
Alju05g0042 777 Pfam Saposin-like type B, region 2 637 669 IPR008138 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0042 Alju-ChrAlju05 375338 382617 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju05g0042 05 375338 382617 Alju05g0042 05 375338 382617 ECH