Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g3196 ATGGACGCCGATTCTTCTTGGGCTGCTCGTCTTTCATCTGCCTCTAAGCGTTACCAATCCGCTCTTCAATCCCGATCAGATATGTTCATGGCTTTTGACGAAAACGACGGAGATGATGATATAAGGGAGGAATTTCTGTGCCCTTTTTGCTCCGAATATTTTGATATTGTTGGATTATGCTGCCACATTGATGAAGAGCATCCCATGGAGGCAAAAAATGGGGTATGTCCAGTTTGTGCATTGAGGGTGGGGTTTGATATGCGCAAGAGGAAATCACGTAAATGTGGATCTTATTCAACACTATCTCTATTGAGGAAGGAGCTGCGAGAAGGAAATTTACAATCCCTTTTTGGTGGGTCCTCATGTACAGTGTCCTCGTCTAATGCATTTGCCGATCCATTATTGTCATCATTTATGTTGCCTGTAGCTGATGAATTGGCCAGTTCTCAGCCCCATTTTCCTACAGAATCAAAATCAACCACGAAAATCTCTGATGAAACTGTTTCAAGACGGAATGTTGAGACATCTACCCTGTCAGGCAAGGATAAGGAAGAGAGGGCAAAAAGATGTGAGTTTGTTCAAGGGCTGCTGCTGTCCACCATATTTGATGACAATTTATGA 621 0.4316 MDADSSWAARLSSASKRYQSALQSRSDMFMAFDENDGDDDIREEFLCPFCSEYFDIVGLCCHIDEEHPMEAKNGVCPVCALRVGFDMRKRKSRKCGSYSTLSLLRKELREGNLQSLFGGSSCTVSSSNAFADPLLSSFMLPVADELASSQPHFPTESKSTTKISDETVSRRNVETSTLSGKDKEERAKRCEFVQGLLLSTIFDDNL 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g3196 206 Pfam Stress-induced protein Di19, C-terminal 101 201 IPR027935 -
Alju03g3196 206 Pfam Drought induced 19 protein (Di19), zinc-binding 43 88 IPR008598 -
Alju03g3196 206 PANTHER PROTEIN DEHYDRATION-INDUCED 19 31 203 IPR033347 -
Alju03g3196 206 MobiDBLite consensus disorder prediction 149 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g3196 Alju-ChrAlju03 56345494 56349508 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g3196 03 56345494 56349508 Alju03g3196 03 56345494 56349508 ECH
Alju01g0468 01 3516472 3518060 Alju03g3196 03 56345494 56349508 ECH
Alju03g3196 03 56345494 56349508 Alju01g0468 01 3516472 3518060 ECH