Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2948 ATGGAAGTGATAACGAACATGGTGGGTGAGAGACCAGTGGTGATATTCAGCAAGAGCAGCTGTTGCCTGAGCCACTCCATCAAGACACTGATAAGTGGCTTTGGGGCTAACCCGACAGTGTACGAGGTTGATGAAATGTCTAACGGTCAGCAGATTGAGAGGGCATTGATTCAAATGGGATGCCAACCAAGTGTTCCGGCTGTTTTCATAGGTCAACAGTTCATTGGTGGTGCTAATCAGATCATGAGCCTCCATCTCCGCAATGAGCTGGTCCCACTCCTCATGAATGCCAAAGCCATTTGGATTTGGAAAAGAAAGTAA 321 0.4735 MEVITNMVGERPVVIFSKSSCCLSHSIKTLISGFGANPTVYEVDEMSNGQQIERALIQMGCQPSVPAVFIGQQFIGGANQIMSLHLRNELVPLLMNAKAIWIWKRK 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2948 106 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Alju03g2948 106 NCBIfam glutaredoxin-like family 5 102 IPR011905 -
Alju03g2948 106 CDD GRX_GRXh_1_2_like 12 93 - -
Alju03g2948 106 Gene3D Glutaredoxin 2 106 - -
Alju03g2948 106 PANTHER GLUTAREDOXIN 1 102 IPR011905 -
Alju03g2948 106 Pfam Glutaredoxin 13 75 IPR002109 -
Alju03g2948 106 SUPERFAMILY Thioredoxin-like 1 101 IPR036249 -
Alju03g2948 106 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Alju03g2948 106 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Alju03g2948 106 PRINTS Glutaredoxin signature 58 71 IPR014025 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2948 Alju-ChrAlju03 54808007 54808327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2948 1 102 Miscellaneous Gene Families AT4G15700 59.804 5.15e-45 139
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1985 01 16490433 16490897 Alju03g2948 03 54808007 54808327 CCT
Alju03g2948 03 54808007 54808327 Alju01g1987 01 16506165 16506482 CCT
Alju03g2948 03 54808007 54808327 Alju03g2948 03 54808007 54808327 ECH